Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01067 ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCAATTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAGGGTGGTGGGGGTGGCGATCAACCAGAGATGAAGAGGCCGGAGAAAATAATTCCATGTCCTAGATGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCGAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATTTCACGGTGGCGGAACAGGATTTCGCCCAAGTTTTTCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGTCAAACGTCTTGA 510 51.76 MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGGDQPEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7305124 7305633 - Cp4.1LG19g06650.1 Cpe19g01067 486475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01067 169 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 8 162 - -
Cpe19g01067 169 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Cpe19g01067 169 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Cpe19g01067 169 MobiDBLite consensus disorder prediction 25 45 - -
Cpe19g01067 169 Pfam Dof domain, zinc finger 47 102 IPR003851 GO:0003677|GO:0006355
Cpe19g01067 169 PANTHER CYCLIC DOF FACTOR 2 8 162 IPR045174 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00808 Cpe19g01067 CCT
Cpe10g00145 Cpe19g01067 CCT
Cpe19g01067 Cpe20g00461 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g01067 Cpe-Chr19:7305124 Cpe03g00467 Cpe-Chr3:2700951 7.23E-39 dispersed
Cpe10g00145 Cpe-Chr10:906579 Cpe19g01067 Cpe-Chr19:7305124 4.46E-94 wgd
Cpe19g01067 Cpe-Chr19:7305124 Cpe20g00461 Cpe-Chr20:2663589 2.44E-54 wgd
Cpe19g01067 Cpe-Chr19:7305124 Cpe09g00808 Cpe-Chr9:7508869 8.08E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51059 PF02701 zf-Dof 1.10E-31 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01067 - - cmax:111496951 328.176