Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01074 ATGGTCCTCCAAATCAGTCTTGCGTTTTCCTTTATTTCCTCGATTTTGTGTCCATCTATGGCCGACCGGCCGGACACCGACAAGAAGACCGAGACTACCAAGAAGGACATGCCGGCTCTTCTTTTGGGCCGATACGAGATCGGGAAGCTCCTTGGTCACGGCACCTTCGCTAAGGTCTACCATGCCCGGAACATTAAAACAGACCAAAGTGTCGCCATTAAAGTTATCGACAAGGAGAAGATCCTCAAGGGTGGTCTAATCGCCCACATCAAACGCGAGATCTCTATCCTCCGCCGCGTTCGACACCCCAATATCGTCCAACTCTTTGAGGTTATGGCCACCAAGGCCAAGATCTACTTCGTTATGGAATATGTACGCGGCGGCGAGCTTTTCAAGAAGGTCTCCAAGGGCCGATTGAAGGAAGAGGTTGCTCGGAAGTACTTTCAGCAATTAATCTCCGCCGTTGCCTTTTGCCATGCGCGCGGTGTTTTCCATCGCGACCTTAAACCGGAGAATTTGTTGCTGGATGAAAATGGGAATCTTAAGGTCTCCGATTTTGGCCTTAGTGCCGTGTCCGACCAAATTCGACAAGATGGGCTGTTTCATACTTTTTGTGGTACACCGGCGTATGTTGCTCCGGAGGTTTTGACCCGGAAAGGGTACGAGGCCGCAAAGGTAGATATTTGGTCCTGTGGGGTTATTCTGTTTGTTCTGATGGCCGGCTATCTGCCCTTCCACGACCAAAATATTATGGCAATGTATAAGAAGATTTACAGGGGTGAGTTCCGTTGTCCGAGATGGTTTTCCCCGGAGCTAATTCGACTCCTATCTCGTCTTTTGGACACAAACCCCGAAACCCGTTTCACAATTCCAGAAATCATGGAGAATAGATGGTTCAAAAAGGGTTACAAGCATATCAAATTCTACATCGAAGATGATAAGGTTTGCAGCATTGAGGACGACCAAAACGATGTCGATATTATCGATTCCTCGTCGGATCAATCTCAATCCGAATCGGATTCCGAAATTATTGAGACCAGAAGAAAGGTTAGTACACTCCCAAGACCGGCGAGTTTGAATGCATTTGACATCATTTCGTTCTCGCCTGGATTTGATCTTTCGGGGTTGTTTGAGGACGGAGGGGAAGAGGCAAGATTTGTGTCCAGTGCGCCGGTGTCGAAGATCATATCGAAATTGGAGGAGATTGCAAAATTGGTGAGTTTCACGGTGAGGAAGAAGGATTGCAGAGTGAGTTTAGAAGGGTCGCGGGAAGGAGTAAAAGGGCCATTGACGATCGCAGCAGAGGTATTCGAGTTGACGCAGAAATTAGTGATGGTGGAGGTGAAGAGGAAAGGGGGAGATAAGGCAGAGTATGAACAGTTCTGTAACGAGGAATTGAAACCGGCATTGTTGAATTTGAAGGTGGAGGATTCACAGCACAAACCTATTGAGAGAGGAAGGGTGAGCGGAAAGCAATCTCCGACTTCGATGCGCCTACTTCACATCGATAAACGTCACACGCCAACGCCCGATGCACCAAATCAAAGGCTCCTGAAATCAGAGTTCGGACAATCGAACTTTCGAGGGGGAAGTGGGGGAAATGGAACACAATATGAACACTTGGGAATTCTCAATTTGGGAGGATTTGAGGGCACGTCTCCTGCCCTCCAACACATGCCATGCTTTTTCGTGTTTCACAAAGATGTATAA 1710 47.89 MVLQISLAFSFISSILCPSMADRPDTDKKTETTKKDMPALLLGRYEIGKLLGHGTFAKVYHARNIKTDQSVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFKKVSKGRLKEEVARKYFQQLISAVAFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLTRKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNIMAMYKKIYRGEFRCPRWFSPELIRLLSRLLDTNPETRFTIPEIMENRWFKKGYKHIKFYIEDDKVCSIEDDQNDVDIIDSSSDQSQSESDSEIIETRRKVSTLPRPASLNAFDIISFSPGFDLSGLFEDGGEEARFVSSAPVSKIISKLEEIAKLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEVFELTQKLVMVEVKRKGGDKAEYEQFCNEELKPALLNLKVEDSQHKPIERGRVSGKQSPTSMRLLHIDKRHTPTPDAPNQRLLKSEFGQSNFRGGSGGNGTQYEHLGILNLGGFEGTSPALQHMPCFFVFHKDV 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7327724 7331101 - Cp4.1LG19g06900.1 Cpe19g01074 486482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01074 569 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Cpe19g01074 569 ProSiteProfiles Protein kinase domain profile. 45 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g01074 569 CDD STKc_SnRK3 44 298 - -
Cpe19g01074 569 CDD CIPK_C 360 470 - -
Cpe19g01074 569 SMART serkin_6 45 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g01074 569 Gene3D Kinase associated domain 1, KA1 356 474 - -
Cpe19g01074 569 PANTHER - 36 479 - -
Cpe19g01074 569 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 36 479 - -
Cpe19g01074 569 Pfam Protein kinase domain 45 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g01074 569 Gene3D Transferase(Phosphotransferase) domain 1 35 355 - -
Cpe19g01074 569 SUPERFAMILY Protein kinase-like (PK-like) 41 311 IPR011009 -
Cpe19g01074 569 MobiDBLite consensus disorder prediction 327 347 - -
Cpe19g01074 569 Pfam NAF domain 356 412 IPR004041 GO:0007165
Cpe19g01074 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Cpe19g01074 569 ProSiteProfiles NAF domain profile. 354 378 IPR018451 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g00148 Cpe-Chr19:1180440 Cpe19g01074 Cpe-Chr19:7327724 1.10E-163 dispersed
Cpe19g01074 Cpe-Chr19:7327724 Cpe11g01018 Cpe-Chr11:8572895 9.63E-178 dispersed
Cpe10g00139 Cpe-Chr10:885645 Cpe19g01074 Cpe-Chr19:7327724 0 wgd
Cpe19g01074 Cpe-Chr19:7327724 Cpe20g00467 Cpe-Chr20:2703149 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63060 PF00069 Pkinase 7.20E-76 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01074 - - csv:101214053 836.254