Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01083 ATGATGTCCAAATCGTATACAAATCTTTTAGATTTAGCTTCAGGGAATTTTCCCATCATGGGTCGTGAGAAGAAGCGACTTCCACGAGTAATGACTGTTGCAGGGGTAATATCAGAGCTTGATGATGACCAGGCAAACAGTGTGACTTCTGAGGGACCTTCCTCAGTTGTGCAAGACCGTATAATTATTGTTGCCAATCAGCTTCCTATTAAAGCGAAGCGTAGACCGGATAATAAAGGCTGGAGTTTTAGTTGGGATGAAGACTCTTTGTTGTGGCAGCTCAAGGATGGTTTGCCGGAAGATATGGAGGTTTTGTATGTAGGATCTTTGCAGGTGGATGTTGATTCTTCCGAACAAGATGATGTATCACAGCTTTTGTTGGAGAGGTTTAAGTGTGTTCCTGCGTTTTTGCCTAAAGAAATTTTATCTAAATTTTATCATGGTTTTTGCAAGCAGCAATTGTGGCCACTCTTCCATTATATGCTTCCGTTCTCAGCGACTCATGGTGGTCGGTTCGATCGGTCTCTGTGGGAAGCTTATGTAGCAGCTAATAAAATATTTTCTCAAAGGGTCATTGAGGTCATAAACCCAGATGATGACTTTGTATGGATTCATGATTACCATTTGATGGTGCTGCCCACCTTTTTGAGGAGAAGGTTTACAAGATTGAGAATGGGCTTTTTTCTTCACAGTCCATTTCCTTCATCAGAAATATATAGGACTTTGCCTGTGAGGGAAGAGATTCTTAAGGCTCTTTTGAATTCAGACCTTATTGGTTTTCACACTTTTGACTATGCTCGACATTTCCTGTCTTGTTGTAGTCGAATGTTGGGTTTGGAATATCAATCAAAGAGGGGTTATATTGGGTTGGAATATTTTGGAAGGACCGTGGGGATAAAGATCATGCCTGTCGGAATTCACATGGGCCAGATGGAGTCAGTCTTAAGGCTGGCCGATAAAGATTGGAGGGTACAGGAGCTCAAGCGACAATTTGAAGGAAAAGTTGTCTTACTTGGAGTTGATGACATGGACATTTTTAAAGGGGTCAATCTGAAGTTGTTGGCAATGGAACAAATGCTAAGGCAACATCCAAAGTGGCAGGGTAGAGCTGTTTTTGTACAGATTGCAAACCCAGCTAGAGGAGGAGGGAAAGATCTTGAGGAAATACAAGATGAAATACGGGAATGCTGCAAGAGAATTAATGACTGTTTTGGACAGCAAAATTATGAACCAATTGTGTTCATTGATCGGCCTGTTTCTCTCACTGAGAGAGCTGCATATTATACCATTGCCGAATGTGTCGTAGTTACAGCGGTGAGGGATGGAATGAACCTAACTCCTTATGAATATGTTGTCTGCAGGCAGGGAACCTCTGGATCAGATTATAGCACAGAAACAAATGGACCACAAAAAAGCATGCTAGTCATATCAGAGTTCATGGGATGTTCCCCTTCTCTCAGTGGTGCAATGCGGGTTAATCCATGGAACATTGAAGCTACTGCCGAAGCATTGAATGAGGCAATATCAATGGCTGATGCTGAGAAGCAATTGCGCCATGAAAAGCATTACAAGTATGTGAGTACTCATGATGTGGCATACTGGTCAAAGAGTTTCTTCCAAGATATGGAAAGAACTTGTAAGGATCACTTCAGAAAACGGTGCTGGGGAATTGGGTTGGGCTTTGGGTTCAGAGTTGTAGCACTTGATCCTAACTTTAAAAAGTTGTCTATTGATGCCATTGTTGCTGAATATTCAAGGTCTAAAAGGAGGGCTATACTATTGGATTATGATGGCACTGTCATGCCACAAACTTCAATTGATAAGACCCCAAGTAATCAAGTTATTTCAATCATAGATTCACTTTGCGATGATGTTAGGAATACTGTTTTTGTTGTCAGTGGAAGAGGGCGTGAAAGTTTGGGCAACTGGTTTTCTTCTTGCGATAAACTTGGGATTGCTGCAGAGCATGGCTATTTTATGAGGTGGTCTGCTGATAAGGATTGGGAAAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATCGCAGAGCCAGTCATGAAATTATATACAGAAGCTACTGACGGCTCTTCCATTGAAACCAAGGAAAGTGCCTTGGTGTGGCACCACCAGGATGCCGACCCTGATTTTGGTTGCAGCCAGGCCAAGGAACTGTTGGATCATCTCGAAAGTGTGCTTGCAAATGAACCAGTTGCTGTAAAAAGTGGTCAGTTCATTGTAGAAGTGAAGCCACAGGGGGTTAGTAAAGGTGTGGTGGCAGAAAAGATTTTCACATCAATGGCCGATGCAGGCAGACGGGCCGATTTTGTGCTATGCATTGGTGATGATAGATCTGATGAAGACATGTTTGAGATCATTGGCAATGCAGTATCAAGTGGCGTCCTCTCTTCCAATACATCAGTTTTTGCATGCACAGTTGGACAGAAACCAAGCAAGGCCAAGTATTACTTGGATGATACAACTGAGGTCATAAACATGCTTGAAGCCCTTGCAGAAGTTTCTGACATTTCTTCTCCTCCAGAATCCCCTTGA 2553 42.5 MMSKSYTNLLDLASGNFPIMGREKKRLPRVMTVAGVISELDDDQANSVTSEGPSSVVQDRIIIVANQLPIKAKRRPDNKGWSFSWDEDSLLWQLKDGLPEDMEVLYVGSLQVDVDSSEQDDVSQLLLERFKCVPAFLPKEILSKFYHGFCKQQLWPLFHYMLPFSATHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDFVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMGQMESVLRLADKDWRVQELKRQFEGKVVLLGVDDMDIFKGVNLKLLAMEQMLRQHPKWQGRAVFVQIANPARGGGKDLEEIQDEIRECCKRINDCFGQQNYEPIVFIDRPVSLTERAAYYTIAECVVVTAVRDGMNLTPYEYVVCRQGTSGSDYSTETNGPQKSMLVISEFMGCSPSLSGAMRVNPWNIEATAEALNEAISMADAEKQLRHEKHYKYVSTHDVAYWSKSFFQDMERTCKDHFRKRCWGIGLGFGFRVVALDPNFKKLSIDAIVAEYSRSKRRAILLDYDGTVMPQTSIDKTPSNQVISIIDSLCDDVRNTVFVVSGRGRESLGNWFSSCDKLGIAAEHGYFMRWSADKDWENCGQGSDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHQDADPDFGCSQAKELLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGVVAEKIFTSMADAGRRADFVLCIGDDRSDEDMFEIIGNAVSSGVLSSNTSVFACTVGQKPSKAKYYLDDTTEVINMLEALAEVSDISSPPESP 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7365597 7370348 + Cp4.1LG19g06480.1 Cpe19g01083 486491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01083 850 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Cpe19g01083 850 CDD HAD_TPP 591 832 - -
Cpe19g01083 850 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Cpe19g01083 850 Gene3D Glycogen Phosphorylase B; 321 528 - -
Cpe19g01083 850 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 842 IPR001830 GO:0003824|GO:0005992
Cpe19g01083 850 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Cpe19g01083 850 TIGRFAM T6PP: trehalose-phosphatase 587 838 IPR003337 GO:0003824|GO:0005992
Cpe19g01083 850 Gene3D Glycogen Phosphorylase B; 50 320 - -
Cpe19g01083 850 SUPERFAMILY HAD-like 590 838 IPR036412 -
Cpe19g01083 850 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 798 IPR006379 -
Cpe19g01083 850 Gene3D - 719 845 IPR023214 -
Cpe19g01083 850 Gene3D - 589 695 IPR023214 -
Cpe19g01083 850 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 1 842 - -
Cpe19g01083 850 Pfam Trehalose-phosphatase 593 827 IPR003337 GO:0003824|GO:0005992
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00131 Cpe19g01083 CCT
Cpe10g00131 Cpe19g01083 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01547 Cpe-Chr4:12122590 Cpe19g01083 Cpe-Chr19:7365597 0 dispersed
Cpe10g00131 Cpe-Chr10:838756 Cpe19g01083 Cpe-Chr19:7365597 0 wgd
Cpe15g00820 Cpe-Chr15:8155545 Cpe19g01083 Cpe-Chr19:7365597 0 wgd
Cpe19g01083 Cpe-Chr19:7365597 Cpe04g00803 Cpe-Chr4:7586345 0 wgd
Cpe19g01083 Cpe-Chr19:7365597 Cpe09g00783 Cpe-Chr9:7260120 4.36E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01083 K16055 - csv:101213082 1655.57