Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g01089 | ATGGCTGAGATTTCAGGACCCAGCAATGGACACCACAGTGTTCCTCTGAACATCAAAGATGAACCCACACCCCTCACTGCCACAGAACCACTCGACTGTATCTCTGTTCCTTTCATTCAAAAGTTGATTGCGGAAGTTTTAGGGACATATTTCTTGATATTTGCTGGTGGTGCATCAGTGGTTGTGAATTTGAGCAAAGACAAAGTCGTCACTTTCCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGGTCTATTCTGTCGGCCACATCTCTGGTGCTCATTTTAACCCTGCTGTCACCATAGCCTTCGCCACCACCAAGAGATTTCCATGGAAACAGGTGCCAGCTTATGTGATAGCTCAAATTCTTGGATCAACATTGGCAAGTGGGACACTTAGGCTAATCTTTAATGGAGAAGAAGACCACTTTTCAGGGACTCTCCCAAGTGACTCATATTTGCAGACCTTTGTCATTGAATTCATCATCACATTTTACCTTATGTTTGTGGTCTCTGGCGTTGCCACTGACAATAGAGCCATTGGTGAACTTGCTGGACTTGCCGTCGGCGCCACAGTGCTTCTCAACGTCATGTTTGCAGGGCCAATTACAGGAGCGTCCATGAATCCAGCCAGAAGCTTGGGGCCTGCAATAGTGTCAAGGCAGTTCAAAGGGTTGTGGATATACATCGTCGCTCCCATTTTGGGGGCAATTTCAGGTGCTTTGGTCTACAACACCATCAGGTTCACAGACAAACCTTTACGAGAAATCACCAAAAGTGCTTCTTTTCTCAGAGGACAAAGTCGTAGTGGCTCGCATTGA | 828 | 46.14 | MAEISGPSNGHHSVPLNIKDEPTPLTATEPLDCISVPFIQKLIAEVLGTYFLIFAGGASVVVNLSKDKVVTFPGISIVWGLVVMVMVYSVGHISGAHFNPAVTIAFATTKRFPWKQVPAYVIAQILGSTLASGTLRLIFNGEEDHFSGTLPSDSYLQTFVIEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLLNVMFAGPITGASMNPARSLGPAIVSRQFKGLWIYIVAPILGAISGALVYNTIRFTDKPLREITKSASFLRGQSRSGSH | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 7398581 | 7400600 | + | Cp4.1LG19g06570.1 | Cpe19g01089 | 486497 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g01089 | 275 | CDD | MIP | 40 | 249 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | SUPERFAMILY | Aquaporin-like | 34 | 260 | IPR023271 | - | |
Cpe19g01089 | 275 | TIGRFAM | MIP: MIP family channel proteins | 44 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | PRINTS | Major intrinsic protein family signature | 40 | 59 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | PRINTS | Major intrinsic protein family signature | 79 | 103 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | PRINTS | Major intrinsic protein family signature | 116 | 135 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | PRINTS | Major intrinsic protein family signature | 161 | 179 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | PRINTS | Major intrinsic protein family signature | 192 | 214 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | PRINTS | Major intrinsic protein family signature | 229 | 249 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | ProSitePatterns | MIP family signature. | 97 | 105 | IPR022357 | - | |
Cpe19g01089 | 275 | Pfam | Major intrinsic protein | 35 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g01089 | 275 | Gene3D | Glycerol uptake facilitator protein. | 30 | 261 | IPR023271 | - | |
Cpe19g01089 | 275 | PANTHER | AQUAPORIN NIP2-1 | 3 | 268 | IPR034294 | - | |
Cpe19g01089 | 275 | PANTHER | AQUAPORIN NIP1-1-RELATED | 3 | 268 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00126 | Cpe19g01089 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00559 | Cpe-Chr1:3240447 | Cpe19g01089 | Cpe-Chr19:7398581 | 9.79E-63 | dispersed | |
Cpe03g00510 | Cpe-Chr3:3002717 | Cpe19g01089 | Cpe-Chr19:7398581 | 3.32E-76 | dispersed | |
Cpe04g00059 | Cpe-Chr4:579274 | Cpe19g01089 | Cpe-Chr19:7398581 | 1.44E-64 | dispersed | |
Cpe04g00060 | Cpe-Chr4:601946 | Cpe19g01089 | Cpe-Chr19:7398581 | 7.26E-40 | dispersed | |
Cpe19g01089 | Cpe-Chr19:7398581 | Cpe19g01091 | Cpe-Chr19:7401374 | 1.12E-154 | proximal | |
Cpe03g01417 | Cpe-Chr3:11397865 | Cpe19g01089 | Cpe-Chr19:7398581 | 2.12E-43 | transposed | |
Cpe02g01458 | Cpe-Chr2:12568479 | Cpe19g01089 | Cpe-Chr19:7398581 | 9.83E-32 | transposed | |
Cpe10g00126 | Cpe-Chr10:808572 | Cpe19g01089 | Cpe-Chr19:7398581 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g01089 | K09874 | - | csv:101219297 | 473.781 |