Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01091 ATGGCAGAGAGTTCAGCTTCCAACAATGAACGCCACAGTCTTTCTATGAGTGTCGAAGATGATTCTGCATCCGATTGTGTCTCTGTACTTCTCATTCAGAAGTTGATTGCAGAGGTTATGGGGACATATTTCGTGATATTTGCAGGCGAAGCATCAGTGGTTGTGAATTTGAGCAAAGATGGAGTCATCACTTTCCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGATCTATTCCGTTGGCCACATTTCCGGTGCTCATTTTAACCCTGCTGTCACCATATCCTTTGCCATTACCAGAAGATTTCCATGGAGTGAGGTGCCTTCATATCTGGCGGCTCAAGTTCTTGGATCAACATTAGCAAGTTGGACACTCAGGCTAATTTTTAATGGAAAACAAGACCATTTTCCAGGAACTCTCCCAAGCGACTCATACATGCAGACCTTTGTCATTGAATTCATTATCACATTCTACCTCATGTTTGTGGTTTCTGGTGTTGCCACTGACAATAGAGCCATTGGTGAACTTGCTGGACTCGCTGTCGGTGCTACCGTGCTTCTGAACGTGATGGTTGCAGGGCCAATTACAGGAGCATCCATGAATCCAGCCAGAAGCTTGGGGCCTGCATTAGTGTTTGCAGAATTCAAAGGATTATGGATTTACATGACAGCACCTATTCTAGGAGCAATATCAGGAGCGTTAGTGTATAATACCATCAGGTTCACAGACAAACCTCTACGAGAGATCGCTCGAAGTGCCTCGTTCCTCAAAAGTCGTCATGTCACCCCATGA 801 44.82 MAESSASNNERHSLSMSVEDDSASDCVSVLLIQKLIAEVMGTYFVIFAGEASVVVNLSKDGVITFPGISIVWGLVVMVMIYSVGHISGAHFNPAVTISFAITRRFPWSEVPSYLAAQVLGSTLASWTLRLIFNGKQDHFPGTLPSDSYMQTFVIEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLLNVMVAGPITGASMNPARSLGPALVFAEFKGLWIYMTAPILGAISGALVYNTIRFTDKPLREIARSASFLKSRHVTP 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7401374 7402527 + Cp4.1LG19g06600.1 Cpe19g01091 486499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01091 266 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Cpe19g01091 266 PANTHER AQUAPORIN NIP2-1 17 262 IPR034294 -
Cpe19g01091 266 Gene3D Glycerol uptake facilitator protein. 2 252 IPR023271 -
Cpe19g01091 266 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe19g01091 266 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe19g01091 266 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe19g01091 266 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe19g01091 266 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe19g01091 266 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe19g01091 266 PANTHER AQUAPORIN NIP1-1-RELATED 17 262 - -
Cpe19g01091 266 Pfam Major intrinsic protein 28 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe19g01091 266 CDD MIP 33 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe19g01091 266 SUPERFAMILY Aquaporin-like 28 250 IPR023271 -
Cpe19g01091 266 TIGRFAM MIP: MIP family channel proteins 37 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01458 Cpe-Chr2:12568479 Cpe19g01091 Cpe-Chr19:7401374 6.60E-33 dispersed
Cpe03g01417 Cpe-Chr3:11397865 Cpe19g01091 Cpe-Chr19:7401374 4.41E-44 dispersed
Cpe05g00746 Cpe-Chr5:4577185 Cpe19g01091 Cpe-Chr19:7401374 3.92E-43 dispersed
Cpe10g00126 Cpe-Chr10:808572 Cpe19g01091 Cpe-Chr19:7401374 4.75E-153 dispersed
Cpe19g01089 Cpe-Chr19:7398581 Cpe19g01091 Cpe-Chr19:7401374 1.12E-154 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01091 K09874 - csv:101219297 405.986