Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01098 ATGAGTTTGTTCTGCCTTCTCCTGCTGCTGCTGCTGCTCCTCCTCCCACCCTCTTCTTGCCTGGCTCAAAAACAGGCTTACATTGTGTACTTTGGAGAGCATTCCGGAGACAAGTCATGGGAGGAGATAGAAGAGAGGCACCATTCGTATTTGATGTCTGTAAAAGACACTGAAAACGATGCAAAATCGTCTCTTCTGTACAGCTACAAGCACACCATCAATGGGTTTGCTGCGGTGCTTACCCAACAACAAGCCTCCAAACTTTCAGAATTGGAGGAAGTGGTGTCTGTAATTGAGAGTAAAAGGTACGGCATGCACACCACAAGGTCGTGGGAGTTCTCTGGGGTTGAAGAAGATAAGCCCAGGCTTAGTGATTTGGTTTCTAAAGCTAAGTCTGGAAAAGATGTGGTGATTGGAATGCTTGATAGTGGGGTGTGGCCAAAATCAAAGAGCTTTAGCGATAAAGGAATGGGTCCCGTTCCAAAATCATGGAAGGGAATCTGCCAAACCGGACCTGGCTTTCAATCACCTCATTGTAATAGAAAGATAATTGGAGCTAGATATTATGTAAAGGGATATGAGCATCATTTTGGTCGTTTAAATGAAACAACGGACTTCCGATCACCGTGCGACATGGACGGCCATGGATCACACACCGCCTCCATTGCCGGTGGCCGGAGGGTCTACAACGTCTCGGCCTTTGGTGGCGTTGCACGGGGCACGGCCTCTGGTGGCGCCCCCGGGGTTCGACTGGCAATATATAAAGTTTGTTGGGCGATTCCCAACCAAATGAAAAGTTTGGGAAACGTTTGCTTCGACACTGACGTGCTGGCCGCCATGGATGATGCCATTTCCGATGGCGTCGACGTTCTCAGCTTGTCCATTGGAAAATCAGATCCGTACAATTACACCGATGATGGAATCGCCATCGGAGCTCTTCATGCCGTTAAAAGGGACATTGTGGTGTCTTGTAGCGCCGGAAATAGTGGCCCTACGCCGTCCACGTTGTCCAATGTTGCACCGTGGATCATCACCGTCGGAGCCAGCACCGTGGATCGGGAATTTTACTCTCCTGTCATCCTCGGAAATGGGTTGAAAATTAAGGGATTGTCGGTGGCGCCGTCCAAATTGAGGAGGAACAAAATGTACCCATTAAAAGCCAAAGGAAAGATAGTGCTGTGCTACAGAGGACAAGGAATCAGCAGATACGCCGGCAGCCTGGAAGTGAAAAGGTCCGGCGGTGCTGGAATGATACTCGGGCTCGTGCCGGCGGTGGGAGCGAGGCTGCACGCCGATCCCCATTTTGTTCCGGCAACGGCGGTGTCTTACGACGATGCAAATAGGATCCTTAAATATATAAAATCTCACCGTAATCCAACCGCCACTATTGTTCCACCCATCACCATCTACGGCTCCAGGCCGGCGCCGGCCATGGCCTATTTCACAAGTAGAGGTCCAAGCCTCGTCGACCCTCATTTTCTCAAGCCTGACATAACAGCACCTGGAGTGGACATATTAGCAGCATGGTCAGAAAAAGATTCCCCAACAAAACTCCCAAAATCGTTTGACCCTCGTATTGTCAAATACAATATCTACTCCGGCACTTCCATGTCCTGCCCTCACGTCTCCGCCGCCGCTGCCCTCCTCCGCGCCATCCACCCCACTTGGTCCCAAGCCGCCATCCGCTCAGCCCTCATGACCACCGCCACCACCACCAACAAATACGGCCACCCCATCACCGACGACTCCACCACCGACAACTCCCCTGCCACTCCTTTCTCCTTTGGGTCTGGCCACTTCCGCCCCACTAAGGCTGCGGACCCCGGGCTTGTGTACGACGCCAATTACACGGACTATCTCCACTACCTCTGCGGCCTGAAAATGAACTCCATTGACCCTTCCTTCAAGTGCCCTCCACGTGCCCTCCACCCCCACGATCTGAATTACCCTTCCATTGCTATCCCTAAACTGAAAGGCGGTGTGAGGATCAAAAGGACGGTGACCAACGTGGGCGGGGGAGGTAAAACTGTGTACTTTTTCGAGAGCTGGGCGCCTCCGGGCGTGGCGGTGAGGGCTTCTCCTAGTGTATTGTACTTCGATAGGGTTGGGCAGAGGAAAAGGTTCACGGTTACGGTGAGTGGGAAAGTGAAGGGTAATGGATACTCCTTCGGTTGGTTCGCTTGGAGTGATGGGATTCACTATGTCAGAAGCCCAATTGCAATTTCTTCAACCTAA 2235 51.9 MSLFCLLLLLLLLLLPPSSCLAQKQAYIVYFGEHSGDKSWEEIEERHHSYLMSVKDTENDAKSSLLYSYKHTINGFAAVLTQQQASKLSELEEVVSVIESKRYGMHTTRSWEFSGVEEDKPRLSDLVSKAKSGKDVVIGMLDSGVWPKSKSFSDKGMGPVPKSWKGICQTGPGFQSPHCNRKIIGARYYVKGYEHHFGRLNETTDFRSPCDMDGHGSHTASIAGGRRVYNVSAFGGVARGTASGGAPGVRLAIYKVCWAIPNQMKSLGNVCFDTDVLAAMDDAISDGVDVLSLSIGKSDPYNYTDDGIAIGALHAVKRDIVVSCSAGNSGPTPSTLSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLRRNKMYPLKAKGKIVLCYRGQGISRYAGSLEVKRSGGAGMILGLVPAVGARLHADPHFVPATAVSYDDANRILKYIKSHRNPTATIVPPITIYGSRPAPAMAYFTSRGPSLVDPHFLKPDITAPGVDILAAWSEKDSPTKLPKSFDPRIVKYNIYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTTNKYGHPITDDSTTDNSPATPFSFGSGHFRPTKAADPGLVYDANYTDYLHYLCGLKMNSIDPSFKCPPRALHPHDLNYPSIAIPKLKGGVRIKRTVTNVGGGGKTVYFFESWAPPGVAVRASPSVLYFDRVGQRKRFTVTVSGKVKGNGYSFGWFAWSDGIHYVRSPIAISST 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7427333 7432187 + Cp4.1LG19g06530.1 Cpe19g01098 486506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01098 744 SUPERFAMILY Subtilisin-like 108 610 IPR036852 GO:0004252|GO:0006508
Cpe19g01098 744 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 19 741 - -
Cpe19g01098 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 106 IPR037045 -
Cpe19g01098 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Cpe19g01098 744 Gene3D - 623 744 - -
Cpe19g01098 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 741 IPR045051 -
Cpe19g01098 744 Pfam Subtilase family 133 598 IPR000209 GO:0006508|GO:0008236
Cpe19g01098 744 Pfam Fibronectin type-III domain 646 741 IPR041469 -
Cpe19g01098 744 ProSiteProfiles Serine proteases, subtilase domain profile. 110 606 - -
Cpe19g01098 744 CDD Peptidases_S8_3 103 570 IPR034197 -
Cpe19g01098 744 Pfam PA domain 385 449 IPR003137 -
Cpe19g01098 744 CDD PA_subtilisin_like 359 463 - -
Cpe19g01098 744 Gene3D - 352 470 - -
Cpe19g01098 744 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Cpe19g01098 744 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Cpe19g01098 744 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Cpe19g01098 744 Pfam Peptidase inhibitor I9 27 103 IPR010259 -
Cpe19g01098 744 Gene3D Peptidase S8/S53 domain 135 619 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g01098 Cpe-Chr19:7427333 Cpe14g00822 Cpe-Chr14:6607006 0 dispersed
Cpe19g01098 Cpe-Chr19:7427333 Cpe14g00809 Cpe-Chr14:6397180 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01098 - - csv:101217410 1266.14