Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01119 ATGTTAAGCTCCATTTCTGCAACTGTTCTAACGAAGATTAAAGAAAGAACCAAAAAAGAGAAGGGGGAGAAAGAAGCCAAAGGAATTCGATTCCCAATCACACATTGCCTTCTCAGGCTCGGTTGGGATCCGATGTCAATTATCAACGCTCACCCTCTTGCCATTGACGCCTCGCGGCTGTTCTGTGAATCCTCGCCTCAGAGGTCAACCTTCGCCATGGAGAAAGAGCCTCTTCTTCCATATATGAGCCCAAGAGGGAAACCGCCTTGTCTCCCTCAATTATATCCACTCCCTGAAAATGATGAAATTATTCTTCCTATGACGCCCACGGAGTTCAAAGATCGCCTGATCTTTGGCCCTTCATCTTCCCCTCAAGATGCTTCTTCTGCGTTCGATGCTTTGACACTGTCTCTTGCCTCACCGAGACCCTCTGCTTCGTCTTCTCGTCAGGACCCATCTACCCCTTTGGACCCCAAATCCCAATCGCCGTCTCAACAGGGAAGGCCTGTGGATTCGAAGCATTCATGCCACAAAAGCAACCTCCACCGCTCTAAAACAGCACCTGCCATGGCGGTCATCAATGATATCAACCATTCGCAGGAGCCCAAGCCACAATTTGGCAAACAATCTATAATCCGCCAAGCTGTTGTTCTTCTAATCATTTACTTATCATTGGGTGTGGTTATATATTGGATTAATCGCGATAATTTTTCAGCTTCGGAGACTCATCCTGTGGTCGATGCATTGTACTTTTGCATTGTAACGATGTGCACTATTGGGTATGGAGATATTACTCCAAATAGTGCAGCGACTAAGCTGTTCTCCGTTTTGTTTGTGTTGGTGGGCTTTGGGTTTATTGATATATTGCTGTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGAAATGTGAAGAGGGGCGTGCAGCGTGAATCTGGGAAATCCTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCATTGGCCTTAGGTGTTGTGATACTTTGTATAGGAATTGGCATGGGTGTTATGCATTTTGTTGAGGACTTAGGGTGGTTGGATTCATTTTATCTTTCAGTCATGTCTGTGACAACCGTTGGATATGGTGATCAGGCGTTCAAGTCGATGACGGGTCGTATTTTCGCTTCAATCTGGTTGCTTGTATCGACCCTTGCTGTCGCTCGGGCGTTCCTTTATTTAGCAGAGGCAAGAGTGGATAAGCGGCATAGGATGATGGCAAAATGGATACTTGGTCACGACATGACTGTCTCTGAGTTTCTTGCTGCTGATACCGACAACAATGGCTGTGTGAGTGTGAGCATAGGATGTTGCTCCTCAATATAA 1374 45.41 MLSSISATVLTKIKERTKKEKGEKEAKGIRFPITHCLLRLGWDPMSIINAHPLAIDASRLFCESSPQRSTFAMEKEPLLPYMSPRGKPPCLPQLYPLPENDEIILPMTPTEFKDRLIFGPSSSPQDASSAFDALTLSLASPRPSASSSRQDPSTPLDPKSQSPSQQGRPVDSKHSCHKSNLHRSKTAPAMAVINDINHSQEPKPQFGKQSIIRQAVVLLIIYLSLGVVIYWINRDNFSASETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVQRESGKSYIIDVKKGRMRIRMKVALALGVVILCIGIGMGVMHFVEDLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGHDMTVSEFLAADTDNNGCVSVSIGCCSSI 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7532894 7536441 + Cp4.1LG19g06280.1 Cpe19g01119 486527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01119 457 SUPERFAMILY Voltage-gated potassium channels 212 297 - -
Cpe19g01119 457 PANTHER TWO-PORE POTASSIUM CHANNEL 3 161 449 - -
Cpe19g01119 457 MobiDBLite consensus disorder prediction 140 183 - -
Cpe19g01119 457 Pfam Ion channel 342 411 IPR013099 -
Cpe19g01119 457 Pfam Ion channel 218 297 IPR013099 -
Cpe19g01119 457 SUPERFAMILY Voltage-gated potassium channels 326 431 - -
Cpe19g01119 457 Gene3D - 305 431 - -
Cpe19g01119 457 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 161 449 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cpe19g01119 457 MobiDBLite consensus disorder prediction 140 170 - -
Cpe19g01119 457 Gene3D - 208 304 - -
Cpe19g01119 457 PRINTS Two pore domain K+ channel signature 374 383 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cpe19g01119 457 PRINTS Two pore domain K+ channel signature 254 282 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00104 Cpe19g01119 CCT
Cpe10g00104 Cpe19g01119 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00104 Cpe-Chr10:697807 Cpe19g01119 Cpe-Chr19:7532894 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01119 K05389 - csv:101220017 638.262