Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01123 ATGGCTGCTTCCACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAACGCCATCAAGCTCTCCCCCAACGCCCCCGATGTTCAGGGCAGTTCAAGAATCAGCATGAGGAAGACCGCCTCCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCATCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGACCCCGAGACTTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCCGAGCTTCTCTCCCGCAACGGCGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGTCTCGACTACTTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATTCTGGCCATCTGGGCCTGCCAGGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGTGGTCCTCTCGGGGAGATCACCGACCCAATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCGGATGACCCAGAGGCCTTCGCAGAGCTGAAGGTGAAGGAGCTCAAGAACGGAAGGCTAGCCATGTTCTCCATGTTCGGCTTCTTCGTTCAGGCCATTGTCACTGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGTCCTACGCCACAAACTTTGTTCCTGGAAAGTGA 798 58.52 MAASTMALSSPSLAGNAIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7560916 7561713 - Cp4.1LG19g06040.1 Cpe19g01123 486531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01123 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Cpe19g01123 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cpe19g01123 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Cpe19g01123 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cpe19g01123 265 MobiDBLite consensus disorder prediction 19 47 - -
Cpe19g01123 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01544 Cpe-Chr2:13109098 Cpe19g01123 Cpe-Chr19:7560916 2.97E-172 dispersed
Cpe16g00726 Cpe-Chr16:7382116 Cpe19g01123 Cpe-Chr19:7560916 0 dispersed
Cpe19g01123 Cpe-Chr19:7560916 Cpe20g00513 Cpe-Chr20:2981021 1.58E-59 dispersed
Cpe20g00512 Cpe-Chr20:2980161 Cpe19g01123 Cpe-Chr19:7560916 4.54E-40 dispersed
Cpe04g00672 Cpe-Chr4:6780729 Cpe19g01123 Cpe-Chr19:7560916 7.73E-152 transposed
Cpe10g00102 Cpe-Chr10:680220 Cpe19g01123 Cpe-Chr19:7560916 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01123 K08912 - csv:101221671 528.094