Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g01173 | ATGGAACTTGGAAGGCCTGGCTCAGGTGGCAAAAGAAGATTAAGGGACCTATTGCTTCAAAAGGATAATCGCTTCTGTGCAGATTGTCGAGCTTTAGATCCTAGATGGGCGTCATCAAATATTGGAGTTTTTATATGCTTGAAATGCTGTGGTGTTCACAGAAGCCTTGGTTCACATATATCAAAGGTGTTATCAGTGACGTTGGATGAATGGAATGATGATGAAATTGATGCCATGATAGAAATTGGAGGGAATAATTCAGCGAATGCGATTTATGAAGCCTTTATTCCTGAGGGATATTCAAAGCCTGGACCGGATGCCACCCATGAACAACGTTCAAAATTCATTCGGTCCAAATATGAACTTCAAGAATTTCTGAAACCGAGCTTGAGAATTTTATCGAACTCCGACAAAAACAATGTCCAAGCAAACTTTGCTTCAAAGGTCATGAACAGTTTTCGTTCAAATTCTTCACAAAAATCAAAGGGTATGGTAGAGTTTCTTGGATTATTGAAGGTGAAAGTGATTAAAGGGACAAACTTAGCTATCAGGGATATGATGTCGAGCGATCCTTATGTAGTCTTGACTCTTGGCCAACAGACTGTCCAGACAGGTATAATCAGGAGCAACTTGAATCCTGTGTGGAATGAGGAACTGATGCTATCTGTACCTCAATCTTTTGGAACCTTAAAGTTGCAAGTATACGACTATGACACGTTTACAGCAGACGACATAATGGGAGAAGCAGAAATTGATCTCCAGCCCTTGATAACATCAGCAATGGCATTTGGGGATGCTGGAATGTTTTCTAACATGCAAATTGGAAAATGGCTGAAATCACACGATAATGCTCTCATAGGCGATAGCACCGTTAATATTGTGGATGGGAAGGTAAAGCAAGAGATATCACTCCAGCTGCAGAATGTGGAATCAGGAGAACTAGATCTAGAGCTAGAATGGATGCCTCTTGGACAATAG | 978 | 40.8 | MELGRPGSGGKRRLRDLLLQKDNRFCADCRALDPRWASSNIGVFICLKCCGVHRSLGSHISKVLSVTLDEWNDDEIDAMIEIGGNNSANAIYEAFIPEGYSKPGPDATHEQRSKFIRSKYELQEFLKPSLRILSNSDKNNVQANFASKVMNSFRSNSSQKSKGMVEFLGLLKVKVIKGTNLAIRDMMSSDPYVVLTLGQQTVQTGIIRSNLNPVWNEELMLSVPQSFGTLKLQVYDYDTFTADDIMGEAEIDLQPLITSAMAFGDAGMFSNMQIGKWLKSHDNALIGDSTVNIVDGKVKQEISLQLQNVESGELDLELEWMPLGQ | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 7898767 | 7902404 | + | Cp4.1LG19g05700.1 | Cpe19g01173 | 486581 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g01173 | 325 | Pfam | C2 domain | 169 | 259 | IPR000008 | - | |
Cpe19g01173 | 325 | PRINTS | HIV Rev interacting protein signature | 42 | 59 | IPR001164 | GO:0005096 | |
Cpe19g01173 | 325 | PRINTS | HIV Rev interacting protein signature | 63 | 84 | IPR001164 | GO:0005096 | |
Cpe19g01173 | 325 | PRINTS | HIV Rev interacting protein signature | 23 | 42 | IPR001164 | GO:0005096 | |
Cpe19g01173 | 325 | SMART | C2_3c | 170 | 265 | IPR000008 | - | |
Cpe19g01173 | 325 | Pfam | Putative GTPase activating protein for Arf | 12 | 127 | IPR001164 | GO:0005096 | |
Cpe19g01173 | 325 | CDD | ArfGap | 14 | 120 | - | - | |
Cpe19g01173 | 325 | CDD | C2_ArfGAP | 168 | 312 | - | - | |
Cpe19g01173 | 325 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 4 | 324 | IPR044518 | GO:0005096|GO:0005543 | |
Cpe19g01173 | 325 | ProSiteProfiles | C2 domain profile. | 154 | 266 | IPR000008 | - | |
Cpe19g01173 | 325 | PRINTS | C2 domain signature | 209 | 222 | IPR000008 | - | |
Cpe19g01173 | 325 | PRINTS | C2 domain signature | 185 | 197 | IPR000008 | - | |
Cpe19g01173 | 325 | PRINTS | C2 domain signature | 230 | 238 | IPR000008 | - | |
Cpe19g01173 | 325 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 | 4 | 324 | - | - | |
Cpe19g01173 | 325 | SMART | arf_gap_3 | 11 | 133 | IPR001164 | GO:0005096 | |
Cpe19g01173 | 325 | Gene3D | C2 domain | 168 | 325 | IPR035892 | - | |
Cpe19g01173 | 325 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 11 | 128 | IPR037278 | - | |
Cpe19g01173 | 325 | Gene3D | Arf GTPase activating protein | 6 | 132 | IPR038508 | - | |
Cpe19g01173 | 325 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 11 | 139 | IPR001164 | GO:0005096 | |
Cpe19g01173 | 325 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 169 | 313 | IPR035892 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00050 | Cpe19g01173 | CCT | |
Cpe09g00726 | Cpe19g01173 | CCT | |
Cpe19g01173 | Cpe20g00562 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01923 | Cpe-Chr1:16392230 | Cpe19g01173 | Cpe-Chr19:7898767 | 5.48E-117 | dispersed | |
Cpe04g01368 | Cpe-Chr4:11123228 | Cpe19g01173 | Cpe-Chr19:7898767 | 2.26E-40 | dispersed | |
Cpe09g01097 | Cpe-Chr9:9472194 | Cpe19g01173 | Cpe-Chr19:7898767 | 1.23E-27 | dispersed | |
Cpe13g00490 | Cpe-Chr13:5053254 | Cpe19g01173 | Cpe-Chr19:7898767 | 5.67E-122 | dispersed | |
Cpe18g00677 | Cpe-Chr18:6805030 | Cpe19g01173 | Cpe-Chr19:7898767 | 3.21E-43 | dispersed | |
Cpe20g00174 | Cpe-Chr20:992807 | Cpe19g01173 | Cpe-Chr19:7898767 | 3.65E-27 | dispersed | |
Cpe10g00050 | Cpe-Chr10:333098 | Cpe19g01173 | Cpe-Chr19:7898767 | 0 | wgd | |
Cpe19g01173 | Cpe-Chr19:7898767 | Cpe20g00562 | Cpe-Chr20:3336764 | 0 | wgd | |
Cpe19g01173 | Cpe-Chr19:7898767 | Cpe09g00726 | Cpe-Chr9:6673279 | 8.15E-138 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g01173 | K12486 | - | csv:101218116 | 574.704 |