Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01177 ATGGGGAAGTTCTTGGTTCTGTCACTACTCCTGATGATAATTTCTGGGTGTGTACAAACTGGAGAATCCAACTCCAATTCCATTTTCATCGACTGTGGCTCAACTTCAAATGAAACTGTTGATGGTCGGAAATGGATTGGCGACCTGAGTTCTGAAGGGAAAGGGAACTTTTCTGTGGGCAATCTTGGTGCTAATATCAATGCCTCCACAGCCACTCTAAACGGCGATTCAGTCTTTGAGCCGCTGTATAAAACTGCTCGGCTTTTTACTAATTCCCTAAACTATACTTTCAAAGGCGTTTGGGGTAATCATTTTGTTCGGCTCCATTTCTGCCCCTTCCCTTTTGGAAACCTCAATGTGAACGAGTCCTCATTTTCTGTCTCAGCAAATGGTCTTAGACTGGTTTCGGAGTTGAATGTTCCCAATGAGATTGCATATAAGAATTTGGAATTTCAGCGGTCTGGGATCAATTCAAGTTGGTTCTCTTTGATTAAAGAGTTCATTATTGTTGTCAATTCAGAGGCATTTGTTCTTGAGTTCTCCCCGTCTGGTGGATCATTTGGGTTCATTAATGCTATTGAAATCGTCCCCCTGGTGGATGAGCTCTTTGCAGGTTCGATTAATAAGGTGGGTGGAAATGCTGTTAGCTTGAATGTGAGTGAAAGGGGATCTGAAACTATGTACAGATTGAATGTTGGAGGTCCGGAGATCAAGCCCGCTCAAGATTCAAATGGTTGGAGAATGTGGGAAGTGGACTCGAGTTATATGATTACAGCAGATGCTGGGTTTGAGATACACAACAGTTCTAATATAACCTATGCTTCCATGAATGACTCCATTGTAGCTCCACTCCCTGTGTACGAAACAGCCAGGACGATATTCCGGAGAGAGGATTTTACTAAGAAGAGCTGTTCTAGGTGGAGAGCAGGATCCAGCCGTGGGGCC 945 43.81 MGKFLVLSLLLMIISGCVQTGESNSNSIFIDCGSTSNETVDGRKWIGDLSSEGKGNFSVGNLGANINASTATLNGDSVFEPLYKTARLFTNSLNYTFKGVWGNHFVRLHFCPFPFGNLNVNESSFSVSANGLRLVSELNVPNEIAYKNLEFQRSGINSSWFSLIKEFIIVVNSEAFVLEFSPSGGSFGFINAIEIVPLVDELFAGSINKVGGNAVSLNVSERGSETMYRLNVGGPEIKPAQDSNGWRMWEVDSSYMITADAGFEIHNSSNITYASMNDSIVAPLPVYETARTIFRREDFTKKSCSRWRAGSSRGA 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7917347 7918817 + Cp4.1LG19g05750.1 Cpe19g01177 486585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01177 315 PANTHER OS03G0124300 PROTEIN-RELATED 4 299 - -
Cpe19g01177 315 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Cpe19g01177 315 Pfam Malectin-like domain 30 293 IPR024788 -
Cpe19g01177 315 Gene3D - 222 307 - -
Cpe19g01177 315 Gene3D - 23 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g01177 Cpe-Chr19:7917347 Cpe06g00713 Cpe-Chr6:4432208 3.35E-30 dispersed
Cpe10g00045 Cpe-Chr10:305816 Cpe19g01177 Cpe-Chr19:7917347 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01177 - - bhj:120073088 495.738