Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01182 ATGGTCGGAGGCTTTGAAGTGGGAGCTGTTCCCTACAACCCGGACGGTTGGGGTCCGCCGGAATCGACCGCCACCCTCGCCGCTTCCTCTAACCTCCCTCTCAATGTCCCCTTTGCCCCATTCTCTCGCTCCGATAAGCTTGGTCGGATCGCCGATTGGACTCGAACAATGAATAACCCTGGTCGCCCCAAGGCTGCTTCGGATTCCGTCTTCGATTTCACTAATGACGATTCCTTCCCGGCCAATGCCGACGAGGACATGTCCTTCCGTTTGGTGGATGGAAAGCCTCCTCCGCGCCCCAAATTTGGCCCTAAATGGCGATTCAACCAGCAAAGGACACAGCTACCTCAGCGCCGTGACGAAGAAGTTGAGGCTCGAAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGACCGTCTTTACAACCTCAACAGGTCCAATGTCAATGCGACCCGTCGTGAAGCTGCTGTCTTCAAATCCTCTGTGGAAATTCAACCAGAATGGAACATGCTTGATCAGATTCCCTTCTCCACTTTCTCGAAGCTGTCCTTCTCTGTTGCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGAACAAACGACCGAATCACTCCCAAGAACGAGCGCCGTCTTGAGCGCTTCAAGAACCGCAACTTCTTTAAGGTAACTACTACCGACGATCCTGTCATTCGTCGTCTCGCAAATGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTACCCTTATGTGTGCAACGAGATCGGTTTATTCCTGGGACATTGTGGTTCAACGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTGCTGTCCACGAGACCTCTCAGGAACCCTTGCCAGAGGCGAAGGACGATATCAATTCAGCGTATTCACTGAGTGTCGAAGCTGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTAGTTAGGGACGGAAATAAGGTGGCCTTTGACGAGCCAAACCCATTTGCAAATGAGGGAGAGGAGGTCGCTTCAGTTGCTTACAGGTACAGGAGGTGGAAACTTGATGATGACATGTATCTTGTAGCCAGGCAGAAATTGGAGACTCAGAGGGGTGCTGTTTTGGCCACAGAGTTGAAGAACAATGCCAATAAATTGGCAAAATGGACAGCTCAAGCCTTATTGGCTAGCGCAGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGAGATCACTTCAACCATGTCATCTTAGCCGTGGTTGGGTATAAACCGAAGGATTTTGCAGCTCAAATTAACTTAAATACGTCTAACATGTGGGGTATTGTCAAATCCATCGTGGATTTGTGCATGAAATTGAATGAAGGTAAGTATGTTTTGGTTAAGGACCCATCCAAACCACAGGTTAGGATCTATGAGGTTCCTGCGGATGCATTTGAGAATGACTATGTTGAGGAGCCACTGGCTGAGGAGGACCAAGTGCAACCTCCAGGAGAAGATGAAAATGGCGCAACTGCTAATGCGGGGACTGATGATGCCGCCGAG 1575 50.03 MVGGFEVGAVPYNPDGWGPPESTATLAASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKAASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNATRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVAEPEDLLLCGGLEFYDRTNDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGATANAGTDDAAE 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7940134 7941985 + Cp4.1LG19g05710.1 Cpe19g01182 486590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01182 525 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 495 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cpe19g01182 525 Coils Coil 118 138 - -
Cpe19g01182 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 372 516 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cpe19g01182 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 372 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cpe19g01182 525 PIRSF Transl_init_eIF3d 1 373 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cpe19g01182 525 PIRSF Transl_init_eIF3d 371 513 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cpe19g01182 525 MobiDBLite consensus disorder prediction 114 134 - -
Cpe19g01182 525 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 6 372 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cpe19g01182 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 372 516 - -
Cpe19g01182 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 4 372 - -
Cpe19g01182 525 MobiDBLite consensus disorder prediction 88 134 - -
Cpe19g01182 525 MobiDBLite consensus disorder prediction 496 525 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00041 Cpe-Chr10:281882 Cpe19g01182 Cpe-Chr19:7940134 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01182 K03251 - csv:101208923 964.911