Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01184 ATGTGTAGCTTGTTTGAGATGGAGAATTTGCAAGGTGACTTGACTGATATTGTGAGAGGATCAAGAACCAATTTTGGTTGCAAAACAGAAGACCCCTTTTCATCCGACTGGATATTTTCATCCGAAATGCCCATGAATTTCTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAATTACAAGACCAAGCTGCTGCAAGAGACCATCAACAATACAGCTTTGGGGATCCATTTTGCGCTGCTGCGCCCATGAGAGATCCTCTCTTTCAAGAGCTGGATATTTGTGGTTTTTTGCATGGTGGTGGCAATTTAGAGGACAAAAGTGGATGCGGTGGAAGTGTTTTTGTTGGTGAAGATGAGGTTATGAAAAGGCCTTCCAATATCTTCTCTCGCATGCTTCAGATCTCTCCACCGCCACCAACAATTCCAAACAAATTCCCAATTTCAGCATCTCCTTGTGATTCCCCTTTGTTAATTCCCAATTGCAATTCCCCATTCATTCCTCCTATTAATTCTGACCTACACCCCTCCGCCCTTCAGATCTCTTCTCCTACAAACCCACCTGGAATCAAGCGAAGGAAGAGCCAAGCAAGGAAGGTGGTCTGTGTTCCTGCTCCAGTGGCTGCCACTAGCCGTCCTAATGGGGAAGTTATTCCTTCTGATCTGTGGGCTTGGAGGAAATATGGTCAGAAACCAATCAAAGGTTCTCCATATCCTAGGGGGTATTATAGATGCAGCAGCTCAAAGGGTTGTTCAGCCAGAAAACAAGTGGAAAGAAGTAGAACAGATCCCAACATGTTGGTGATTACATACACATCTGAGCACAACCATCCATGGCCAACGCAAAGAAATGCTCTAGCAGGCTCTTCAAGGTCCCAACAATCAAAAAACAACACGCCCAATTCCTCAACACTTTCCTCCGCATCTCTCCCTCAAAAGCCAACAACAGCTCCAGAGGGACCACAAAACAACAACCAACATCCAAACAACAATGACAATAATGGAGCAAGATCCTCAGCAACCTCCAATCATGTCAAACAAGAGCCTCCTCAGGAGATTCAGAAACCCTTTGCAACAGAAGCTGAAGGGTTTCCATATAGGGAGGCAATGGCAATGGCAATGGCTGTCCATCACAATCAAAGTGATGATTTTTTTGCAGATTTGGAGGAATTAGGGACTGACCCTTCAAATCTCTTGTTCACTCAACCCCAACAATTACACCAAACCCAAGGATCCGGCGGCTTGGACGACGTCGTTGCATTCAATAATCTCTTCGATTGGGCAGCTGAAGACAACAACCATTCATTTCAGGAACCGCCAACTGGTAGCAAGAGAGGTTTTTATTAA 1380 44.71 MCSLFEMENLQGDLTDIVRGSRTNFGCKTEDPFSSDWIFSSEMPMNFSSSSSSSSSSSSSSSSSSSSSSQLQDQAAARDHQQYSFGDPFCAAAPMRDPLFQELDICGFLHGGGNLEDKSGCGGSVFVGEDEVMKRPSNIFSRMLQISPPPPTIPNKFPISASPCDSPLLIPNCNSPFIPPINSDLHPSALQISSPTNPPGIKRRKSQARKVVCVPAPVAATSRPNGEVIPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQQSKNNTPNSSTLSSASLPQKPTTAPEGPQNNNQHPNNNDNNGARSSATSNHVKQEPPQEIQKPFATEAEGFPYREAMAMAMAVHHNQSDDFFADLEELGTDPSNLLFTQPQQLHQTQGSGGLDDVVAFNNLFDWAAEDNNHSFQEPPTGSKRGFY 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7950073 7952856 - Cp4.1LG19g05630.1 Cpe19g01184 486592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01184 459 SUPERFAMILY WRKY DNA-binding domain 228 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe19g01184 459 MobiDBLite consensus disorder prediction 188 207 - -
Cpe19g01184 459 Gene3D WRKY domain 204 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe19g01184 459 MobiDBLite consensus disorder prediction 283 368 - -
Cpe19g01184 459 MobiDBLite consensus disorder prediction 256 275 - -
Cpe19g01184 459 Pfam WRKY DNA -binding domain 232 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe19g01184 459 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 11 440 - -
Cpe19g01184 459 MobiDBLite consensus disorder prediction 283 360 - -
Cpe19g01184 459 ProSiteProfiles WRKY domain profile. 225 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe19g01184 459 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 440 IPR044810 GO:0003700
Cpe19g01184 459 MobiDBLite consensus disorder prediction 48 78 - -
Cpe19g01184 459 SMART WRKY_cls 230 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00801 Cpe-Chr4:7578058 Cpe19g01184 Cpe-Chr19:7950073 2.09E-39 dispersed
Cpe13g00277 Cpe-Chr13:2202479 Cpe19g01184 Cpe-Chr19:7950073 6.82E-38 dispersed
Cpe14g00491 Cpe-Chr14:3117647 Cpe19g01184 Cpe-Chr19:7950073 1.18E-35 dispersed
Cpe15g00822 Cpe-Chr15:8165599 Cpe19g01184 Cpe-Chr19:7950073 1.46E-35 dispersed
Cpe19g01184 Cpe-Chr19:7950073 Cpe04g01336 Cpe-Chr4:10951905 4.56E-32 dispersed
Cpe19g01184 Cpe-Chr19:7950073 Cpe09g00709 Cpe-Chr9:6350681 1.10E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51070 PF03106 WRKY 2.60E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01184 - - cpep:111782108 903.664