Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe19g01198 | ATGGCGCCGGGCCTCAGAGACCTGCAGCTCACCCAGGTCGCCCAGCGTCCCTCGGCTATTTCTGCGGCTCCTGAGCTTTCCGAGGATCTCGAGGATGTGCGCTTGCTTGATTCCTACGAGAGCCCGGAGGAGAATTTGGGCGAAATTGGGGAAAGTATGAGGAGGGTTCAGGTCACAGTTTCTGGGATGACCTGCGCTGCTTGTTCTAATTCCGTCGAATCGGCTCTCAGGGGGCTTAATGGCGTTTTGACGGCTTCCGTTGCTTTGCTTCAGAACAGAGCTGACGTGGTTTTCGACCCCAGCTTCGTTAAGGTTGAGGACATCAAGGAAGCGATAGAAGATGCTGGATTTGAGGCTGAGATTATACCTGAAACCAGTTCAGTTGGAAAGAAGAAGTCCGATGGAACGCTGGTGGGTCAATTCAGCATAGGAGGTATGACATGTGCAGCATGTGTGAATTCGGTAGAAAGCATTTTAAAAGATCTTCCTGGCGTTAGGAGAGCGGTAGTTGCTTTAGCCACATCATTGGGAGAGGTTGAATATGATCCAACAATAACCACTAAAGACGACATAATTAATGGTATTGAGGATGCTGGATTTGAAGCTTCACTTGTACAGAGCAGTGAGCAAGACCAAATTTTTGTAGCGGTTTCCGGCATTGCTGGCGAGGTTGATGTACAGTTTTTGGAAGTCATACTCACCAACTTGAAAGGGGTGAGGCGGTTCCTCTTCAACAGGACATCAGGAAAACTGGAGGTTGTTTTTGACCCACAACTTATGGGTCCCAGATCCTTGGTGGATGAGATTGAGGGAAGAAGCAACAAAAAATTTAAGCTGCATGTTACCAGCCCTTACAGTAGGTTAACTTCTAAAGATGCTGAAGAAGCTATAAACATGTTTCGCCTTTTTGTCTCCAGTCTGTCTCTCAGTGTACTGATCTTTCTCCTACGAGTAGTATGTCCTCATATTCCTTTAATCTACTCATTGTTACTCCGGCGCTGTGGGCCGTTCATCATGGATGATTGGTTGAAGTGGGCATTGGTGACTGTTGTGCAATTTATCATTGGAAAGCGCTTCTATGTCGCAGCTGCTAGAGCTCTTCGAAATGGTTCAACGAACATGGATGTATTGGTTGCTTTGGGTACCACGGCCTCTTACACTTATTCTGTTTGTGCACTTCTATATGGTGCAGTCACCGGATTTTGGTCTCCTACTTATTTTGAAACAAGTGCTATGTTGATAACCTTTGTATTACTGGGGAAGTATTTGGAGTGTCTTGCCAAGGGGAAAACATCAGATGCCATCAAGAAGTTGGTAGAACTTGCTCCTGCCACTGCTCTATTGCTTATCCAAGATAAAGGTGGGAATCTGATAGAAGAGAGGGAAATAAATGCTCTGCTAATTCAACCAGGCGACGTGTTGAAAGTTGTTCCTGGTGCAAAGGTTCCAGCAGATGGCGTTGTTGTTTGGGGTTCGAGTTATGTTAATGAGAGTATGGTTACTGGAGAATCTATACCTGTTCTGAAGGAGCTTAACTCGCCTGTTATTGGGGGTACAATTAATCTTCATGGAGCCCTTCACATTCAAGCAACCAAAGTAGGATCTGATGCTGTTTTGAACCAGATTATTAGTTTGGTCGAGTCAGCACAGATGTCTAAAGCCCCAATTCAGAAATTTGCTGATTTTGTAAGTATCATGATGGGTACTTTAAAATCTGTCAATTCTGGTATTCATAGGCTTCTGTTTGGCCTGCAGGTAGCAAGCATATTCGTTCCAACAGTTGTTGCAATGGCATTGTGCACATTATTTGGTTGGTACGTTGGAGGAATTCTTGGGGCTTATCCAGCTGAATGGCTCCCAGAAAATGGGAATTACTTTGTGTTTTCGCTCATGTTTGCCATAGCAGTGGTGGTGATTGCATGCCCTTGTGCGCTAGGCTTGGCAACACCGACTGCTGTCATGGTTGCAACAGGGGTTGGTGCCAGCAATGGCATCTTGATCAAAGGAGGTGATGCTTTGGAGAGGGCCCAGAAGGTTAAGTACGTGATATTTGATAAAACAGGCACACTAACCCAAGGGAAAGCGTCGGTTACCACTGCCAAAGTCTTCACTGAAATTTCTCGAGGAGATTTTCTTAAGCTGGTTGCTTCTGCAGAGGCTAGCAGCGAACACCCATTGGGAAAAGCTATAGTCGACTATGCACGTCATTTCCATTTCTTCGATGAGCCTTCTACAACCGAAAATGTGGGAAACCAAAGTAAAGAAGCTTCTGGATGGCTTTTCGATGTCACGGAGTTCTCTGCATTGGCAGGCAAAGGAATCCAGTGCTTTGCAGAGGGGAAAAGGATTCTTGTTGGGAACAGGAAGTTGATGAATGAAAGTGGAGTTTCCATAGCGCCTCATGTGGATAATTTCGTTATAGAGCTCGAAGAGAATGCAAAGACTGGTGTTCTTGTTGCATATGATGATAGGTTAATTGGAGTTTTGGGAATAGCAGATCCACTGAAGAGAGAAGCTGCAGTTGTTGTTGAGGGTCTTGTGAAAATGGGAGTTGCTCCAGTCATGGTTACAGGGGACAATTGGAGAACGGCTCAGGCTGTCGCCAAAGAGCTTGGCATACAAGATGTGAGGGCAGAAGTAATGCCAGCAGGAAAAGCGGAAGTCATCCAAAACTTCCAAAAGGATGGGAGCATAGTTGCGATGGTAGGCGATGGCATCAACGACTCGCCTGCTCTAGCTACTTCGGATATCGGAATCGCAATTGGTGCGGGGACTGATATTGCCATTGAGGCAGCCGACTTCGTGTTGATGAGAAATAATTTAGAAGACGTAATTACAGCCATCGATCTCTCGAGGAAGACATTCAATCGGATCCGATTGAATTACATGTTTGCAATGGCGTACAATGTGATAGCAATTCCTGTTGCTGCCGGACTATTCTTTCCATCTTTGGGGCTTAAGTTGCCTCCATGGGCGGCTGGTGCGTGCATGGCTTTGTCGTCGGTCAGTGTTGTTTGCTCGTCTTTACTTCTTAGGAGATACAAAAGACCAAGACTCACAACCATTCTTGAAATCACTGTAGAATAG | 3087 | 45.8 | MAPGLRDLQLTQVAQRPSAISAAPELSEDLEDVRLLDSYESPEENLGEIGESMRRVQVTVSGMTCAACSNSVESALRGLNGVLTASVALLQNRADVVFDPSFVKVEDIKEAIEDAGFEAEIIPETSSVGKKKSDGTLVGQFSIGGMTCAACVNSVESILKDLPGVRRAVVALATSLGEVEYDPTITTKDDIINGIEDAGFEASLVQSSEQDQIFVAVSGIAGEVDVQFLEVILTNLKGVRRFLFNRTSGKLEVVFDPQLMGPRSLVDEIEGRSNKKFKLHVTSPYSRLTSKDAEEAINMFRLFVSSLSLSVLIFLLRVVCPHIPLIYSLLLRRCGPFIMDDWLKWALVTVVQFIIGKRFYVAAARALRNGSTNMDVLVALGTTASYTYSVCALLYGAVTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLLIQDKGGNLIEEREINALLIQPGDVLKVVPGAKVPADGVVVWGSSYVNESMVTGESIPVLKELNSPVIGGTINLHGALHIQATKVGSDAVLNQIISLVESAQMSKAPIQKFADFVSIMMGTLKSVNSGIHRLLFGLQVASIFVPTVVAMALCTLFGWYVGGILGAYPAEWLPENGNYFVFSLMFAIAVVVIACPCALGLATPTAVMVATGVGASNGILIKGGDALERAQKVKYVIFDKTGTLTQGKASVTTAKVFTEISRGDFLKLVASAEASSEHPLGKAIVDYARHFHFFDEPSTTENVGNQSKEASGWLFDVTEFSALAGKGIQCFAEGKRILVGNRKLMNESGVSIAPHVDNFVIELEENAKTGVLVAYDDRLIGVLGIADPLKREAAVVVEGLVKMGVAPVMVTGDNWRTAQAVAKELGIQDVRAEVMPAGKAEVIQNFQKDGSIVAMVGDGINDSPALATSDIGIAIGAGTDIAIEAADFVLMRNNLEDVITAIDLSRKTFNRIRLNYMFAMAYNVIAIPVAAGLFFPSLGLKLPPWAAGACMALSSVSVVCSSLLLRRYKRPRLTTILEITVE | 1028 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 8043954 | 8049755 | - | Cp4.1LG19g05470.1 | Cpe19g01198 | 486606 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe19g01198 | 1028 | ProSitePatterns | Heavy-metal-associated domain. | 60 | 90 | IPR017969 | GO:0046872 | |
| Cpe19g01198 | 1028 | PRINTS | H+-transporting ATPase (proton pump) signature | 902 | 918 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Cpe19g01198 | 1028 | PRINTS | H+-transporting ATPase (proton pump) signature | 874 | 890 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Cpe19g01198 | 1028 | PRINTS | H+-transporting ATPase (proton pump) signature | 933 | 958 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Cpe19g01198 | 1028 | Gene3D | - | 53 | 125 | - | - | |
| Cpe19g01198 | 1028 | ProSitePatterns | Heavy-metal-associated domain. | 143 | 172 | IPR017969 | GO:0046872 | |
| Cpe19g01198 | 1028 | ProSiteProfiles | Heavy-metal-associated domain profile. | 138 | 204 | IPR006121 | GO:0046872 | |
| Cpe19g01198 | 1028 | ProSiteProfiles | Heavy-metal-associated domain profile. | 212 | 270 | IPR006121 | GO:0046872 | |
| Cpe19g01198 | 1028 | SUPERFAMILY | HMA, heavy metal-associated domain | 135 | 208 | IPR036163 | GO:0046872 | |
| Cpe19g01198 | 1028 | Pfam | Heavy-metal-associated domain | 58 | 118 | IPR006121 | GO:0046872 | |
| Cpe19g01198 | 1028 | Pfam | Heavy-metal-associated domain | 141 | 201 | IPR006121 | GO:0046872 | |
| Cpe19g01198 | 1028 | CDD | P-type_ATPase_Cu-like | 301 | 998 | - | - | |
| Cpe19g01198 | 1028 | CDD | HMA | 57 | 120 | IPR006121 | GO:0046872 | |
| Cpe19g01198 | 1028 | Gene3D | - | 690 | 780 | IPR023299 | GO:0000166 | |
| Cpe19g01198 | 1028 | Gene3D | - | 781 | 833 | IPR023299 | GO:0000166 | |
| Cpe19g01198 | 1028 | PANTHER | HEAVY METAL P-TYPE ATPASE | 583 | 1021 | - | - | |
| Cpe19g01198 | 1028 | Gene3D | - | 140 | 211 | - | - | |
| Cpe19g01198 | 1028 | SUPERFAMILY | HAD-like | 682 | 1008 | IPR036412 | - | |
| Cpe19g01198 | 1028 | SUPERFAMILY | Calcium ATPase, transduction domain A | 460 | 546 | IPR008250 | - | |
| Cpe19g01198 | 1028 | TIGRFAM | TIGR00003: copper ion binding protein | 140 | 202 | IPR006122 | GO:0005507 | |
| Cpe19g01198 | 1028 | TIGRFAM | TIGR00003: copper ion binding protein | 56 | 119 | IPR006122 | GO:0005507 | |
| Cpe19g01198 | 1028 | SFLD | p-type atpase | 665 | 954 | IPR044492 | - | |
| Cpe19g01198 | 1028 | PRINTS | P-type cation-transporting ATPase superfamily signature | 925 | 937 | - | - | |
| Cpe19g01198 | 1028 | PRINTS | P-type cation-transporting ATPase superfamily signature | 496 | 510 | - | - | |
| Cpe19g01198 | 1028 | PRINTS | P-type cation-transporting ATPase superfamily signature | 827 | 838 | - | - | |
| Cpe19g01198 | 1028 | PRINTS | P-type cation-transporting ATPase superfamily signature | 849 | 859 | - | - | |
| Cpe19g01198 | 1028 | PRINTS | P-type cation-transporting ATPase superfamily signature | 683 | 697 | - | - | |
| Cpe19g01198 | 1028 | PRINTS | P-type cation-transporting ATPase superfamily signature | 902 | 921 | - | - | |
| Cpe19g01198 | 1028 | PANTHER | ATP7, ISOFORM B | 21 | 569 | - | - | |
| Cpe19g01198 | 1028 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 685 | 691 | IPR018303 | - | |
| Cpe19g01198 | 1028 | Gene3D | - | 650 | 959 | IPR023214 | - | |
| Cpe19g01198 | 1028 | ProSiteProfiles | Heavy-metal-associated domain profile. | 55 | 121 | IPR006121 | GO:0046872 | |
| Cpe19g01198 | 1028 | Pfam | haloacid dehalogenase-like hydrolase | 679 | 915 | - | - | |
| Cpe19g01198 | 1028 | SFLD | Haloacid Dehalogenase | 665 | 954 | - | - | |
| Cpe19g01198 | 1028 | PANTHER | HEAVY METAL P-TYPE ATPASE | 21 | 569 | - | - | |
| Cpe19g01198 | 1028 | Pfam | E1-E2 ATPase | 442 | 569 | - | - | |
| Cpe19g01198 | 1028 | Pfam | E1-E2 ATPase | 585 | 661 | - | - | |
| Cpe19g01198 | 1028 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 585 | 1011 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
| Cpe19g01198 | 1028 | PANTHER | ATP7, ISOFORM B | 583 | 1021 | - | - | |
| Cpe19g01198 | 1028 | SUPERFAMILY | HMA, heavy metal-associated domain | 51 | 123 | IPR036163 | GO:0046872 | |
| Cpe19g01198 | 1028 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 614 | 712 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Cpe19g01198 | 1028 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 763 | 984 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Cpe19g01198 | 1028 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 413 | 599 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Cpe19g01198 | 1028 | CDD | HMA | 140 | 203 | IPR006121 | GO:0046872 | |
| Cpe19g01198 | 1028 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 401 | 991 | IPR023298 | - | |
| Cpe19g01198 | 1028 | Gene3D | - | 428 | 550 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe10g01062 | Cpe-Chr10:6338078 | Cpe19g01198 | Cpe-Chr19:8043954 | 1.01E-14 | dispersed | |
| Cpe11g00623 | Cpe-Chr11:3953260 | Cpe19g01198 | Cpe-Chr19:8043954 | 8.34E-60 | dispersed | |
| Cpe14g00212 | Cpe-Chr14:1185043 | Cpe19g01198 | Cpe-Chr19:8043954 | 8.71E-97 | dispersed | |
| Cpe18g00631 | Cpe-Chr18:6534383 | Cpe19g01198 | Cpe-Chr19:8043954 | 4.69E-65 | dispersed | |
| Cpe19g00213 | Cpe-Chr19:1745088 | Cpe19g01198 | Cpe-Chr19:8043954 | 1.37E-15 | dispersed | |
| Cpe10g00022 | Cpe-Chr10:158888 | Cpe19g01198 | Cpe-Chr19:8043954 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe19g01198 | K17686 | - | csv:101205642 | 1729.92 |