Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00012 ATGAAGTTTAAATCCACTAACCGTTCATTCAATTCATACCCAGATGAAAATCATGCAAGTATTAGGAGATTGATGAGGCACACTGAGGATGATCACAAGAACCTATGGGACAAGGATCCGCTCAGCGATTTGAAGAACAACCAGGATATGAAATGTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGCGGTTTTAATGATGTTCATTTCTGTGGTCTTTTCTGTCTCTGTGGTTCTTAGAGACCCACCATCCGATGCTGTAATTGAAGGTTCAGATGTGTGGATTCCTCAGTGGAACTCCGACCCAGTAGATTCTAAGGATGGAGATCTTCATAGGGATATAGAGGCAGTTGATAAACTGCTTAGTGGCCTTCTTTCTGCCAAACATGAGGAAGGTTCTTGTCTCAGTAGGTACAATTCAGCTTCATATCAACGCAAGCTGGCGTACCAACCCTCTTCTTTCCTGATCTCCAAATTGCGGAGTTATGAAGATCTTCATAAGCGTTGTGGAGTCTACACTGAGTCTTACAACAAAACTTTGGAGCAGCTTGGGTCTAATGGTAGTAGCAGCTCCTCAGACTGTAAATATGTTGTGTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACCCTCGCTTCAGCATTTCTTTATGCTCTCCTCACAAATCGTGTTCTACTTGTGGACCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCATTTCCTGAGGTTTCCTGGTTTCTGCCCCAAGATTTCCCGTTGAAACATAAATTCAGCGAATTCAACCACAACTCTCCTAATTGCTATGGGAAAATAATGAAGAACAATAGGAGCACAGACCCAAGTGGAATGATCTTGCCATCTCTTGTTTATCTTCATTTGGTCCATGATTATGATGATGATGACAAGCTTTTTTTCTGTGATCAACACCAATCTCTTCTGCACCAATCCCCTTGGCTTGTTATGAAAACAGACAACTATTTTGTCCCCTCTCTCTTTTTGATCCCATCATTCGAGAAAGAACTTCATGATCTTTTCCCAAATAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGATTCATCCTGTGAATTCAGTTTGGGGACTGATTACGAGATATTATCAGGCTTACTTGGCTAGAGCTAGTGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGAACTGGACCTTTTCAACACATCTTGGATCAGGTTTTGGACTGTACCCTGAAGGAGAATCTGTTGCCACAAACGGAAAGGCGAACAAATGTGGTCGGTCTGGCTAGTAATCGAAAGTCAAAGGCCGTGCTGATAACTTCCTTGAGCGCTGGCTACTTCGAGAAGTTGAGAGATATTTACTGGGAGAATCCGACGGTGACGGGAGACAGAGTTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACTGAGAAGAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTAATGTAGTGGTCACTAGTTCATGGTCGACCTTTGGATATGTGGCTCAAGGCCTTGGCGGTCTGAAACCATGGATATTGTACAAACCCGAGAATCGTACTGCACCGAATCCACCCTGCCGACGAGCCATGTCCATGGAGCCCTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGCAAACTTGTTCCTCATGTGAGGCATTGCGAGGACATGGCCTGGGGGCTTAAGTTGGTTGATCAACAGGATTGA 1770 43.56 MKFKSTNRSFNSYPDENHASIRRLMRHTEDDHKNLWDKDPLSDLKNNQDMKCGFSSIRVMGMFAVLMMFISVVFSVSVVLRDPPSDAVIEGSDVWIPQWNSDPVDSKDGDLHRDIEAVDKLLSGLLSAKHEEGSCLSRYNSASYQRKLAYQPSSFLISKLRSYEDLHKRCGVYTESYNKTLEQLGSNGSSSSSDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKHKFSEFNHNSPNCYGKIMKNNRSTDPSGMILPSLVYLHLVHDYDDDDKLFFCDQHQSLLHQSPWLVMKTDNYFVPSLFLIPSFEKELHDLFPNKDTVFHFLGRYLIHPVNSVWGLITRYYQAYLARASERIGIQIRVFDTGTGPFQHILDQVLDCTLKENLLPQTERRTNVVGLASNRKSKAVLITSLSAGYFEKLRDIYWENPTVTGDRVSFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTNVVVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMAWGLKLVDQQD 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 76697 79208 + Cp4.1LG20g00010.1 Cpe20g00012 486641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00012 589 PANTHER FUCOSYLTRANSFERASE 2-RELATED 23 588 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cpe20g00012 589 Gene3D - 372 533 - -
Cpe20g00012 589 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 23 588 - -
Cpe20g00012 589 Gene3D - 192 245 - -
Cpe20g00012 589 Pfam Xyloglucan fucosyltransferase 116 558 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01481 Cpe-Chr1:8838019 Cpe20g00012 Cpe-Chr20:76697 0 dispersed
Cpe14g00402 Cpe-Chr14:2483935 Cpe20g00012 Cpe-Chr20:76697 8.52E-168 dispersed
Cpe02g01051 Cpe-Chr2:9679155 Cpe20g00012 Cpe-Chr20:76697 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00012 K13681 - csv:101219153 988.793