Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00057 ATGGGGTGTGTGAACTCGAAGCAGGCGGTGTCCGTGACGCCTGCATTCGATCACTCCGGCGCATTTCGGGACAATGAATCAACGGCGGTGGGGAGCTCGGGTCGTAGCCGATGTGGGTTGGGGGAGATTGAGAGGAGTTCGAAGGCGAAGACCAAGAGGAAGTCGAAGGGGTCCAGTGAGTTCTATGGGGTTGGGAGTGAGCTGGGTGAATCGGGGAGGGCGACTTCAAATGGCGCAGGGAATCAGACTTTGAGCTTCAGATTGGGGAATTTGAACAAGTATATTGAAAGTGAGCAAGTGGCGGCAGGGTGGCCGGCCTGGCTCAGCGCTGTCGCCGGTGAGGCCATTCAAGGTTGGATTCCTCTCCGGTCCGATGCTTATGAGAAGCTGGAAAAGATTGGACAAGGTACGTATAGCAGTGTATTTCGAGCACGCGAACTCGAAACAGGAAGGATTGTTGCTTTAAAGAAGGTTCGGTTCGACAATTTTGAGCCTGAAAGTGTTAGATTTATGGCACGAGAGATCATGATTCTCCGCAGGCTTGATCACCCTAATATCATCAAATTGGAGGGCTTAATTACGTCTCGTTTATCATGTAACATTTACCTTGTGTTTGAGTACATGGACCATGACATTACTGGGCTCTTGTCCTCCCCTGATATCACTTTTAGTGAATCACAGATTAAATGCTACATGAAACAATTGATATCCGGGCTTGAGCATTGTCACTCACGTGGTGTAATGCATCGGGATATTAAAGGATCTAATCTTCTAGTTGATAACGAAGGGGTATTGAAGGTAGCTGATTTTGGATTGGCGAACTTCTATAATTCCGGGCAACAGCAACCTCTAACGAGTCGTGTTGTCACTCTGTGGTATCGTCCTCCTGAACTTCTACTGGGTTCAACAGACTATAATGCATCTGTGGATCTTTGGAGTGTTGGCTGTGTTTTCGCAGAACTCCTTGTTGGGAAACCTATTCTTCAGGGAAGAACAGAGGTCGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCTCCTCCTGATGAGTACTGGAAAAGGTCTAAACTTCCTCATGCCACTTTGTTCAAGCCACAACATCCATATAATAATTGCCTACGCCAGACATTCAAAGATTATCCTTCGACGACTGTGAACTTGCTAGAAACGCTTCTTTCCGTGGAACCATACAAGCGTGGAGTTGCCTCCTCTGCTCTCACATCTGCGTATTTCAGTACAAAACCGAAAAAACATAGTGGAAGAGCCCGTGGACTAGATAACAGAAGGTTAATGCGAAATCATCATGGAACCAATAAATTGGCACCAGCTGTGGACTCATCAGTCTCAGCTCGAGCTCTGCATACAATTAGTATTAATGCACAAGATCTAAAAGAAGAAAAGGTTACCAAAGCTGGCCAGGCGCAAAAGCTGTCAATTGATAAACTGGAAGAGACTATACATGAAACGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCTCTACAAGTTTCGACATCGAGTGGCTTTGCGTGGGCAAGACGACGAAGAGACGATGCCTCTATTCGGTGTTATTCCAGATCAATTTCACGAGGAGAACTAATTAATGGGCTGGACCATTCTGCTACATCAAGAAGCAATTTGGAGTCTAAGTTTCATGAGAAGGTAGACATGTTATCCATGAGCCGCTCAAGTTCCAAGGGTCCTGAATCAAGTGAGAGATCCAAGGTTGTGATAAGGAATCAGTGGGGCAAGTTTGAGCGTCCTGATTCCTTTGATACTTCGGATGAGTACCACTCCCAGGACTTTGCAGTGGCACTTTCTTTGCGAGATGAACTGGGAGCTAAGAGGAATAATCTGAGTTATCAGGACCAAGTGGACAAAGTTGAATATTCTGGGCCCTTGTTATCTCAATCTAGCAGAGTGGATGAACTGCTAGACAGACACGAGAGGCATATCCGACAGACAGTTCGAAGATCATGGTTTCAACGAGACAAGGTAGAACTTCCCTGTCAGACAACTAGAAGCTCACAGCAGCTTTGTTGCGAGCTCGTAAAAATTGATTGCCAACCAGTTGGAAAATTTTGA 2088 46.26 MGCVNSKQAVSVTPAFDHSGAFRDNESTAVGSSGRSRCGLGEIERSSKAKTKRKSKGSSEFYGVGSELGESGRATSNGAGNQTLSFRLGNLNKYIESEQVAAGWPAWLSAVAGEAIQGWIPLRSDAYEKLEKIGQGTYSSVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCNIYLVFEYMDHDITGLLSSPDITFSESQIKCYMKQLISGLEHCHSRGVMHRDIKGSNLLVDNEGVLKVADFGLANFYNSGQQQPLTSRVVTLWYRPPELLLGSTDYNASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKRSKLPHATLFKPQHPYNNCLRQTFKDYPSTTVNLLETLLSVEPYKRGVASSALTSAYFSTKPKKHSGRARGLDNRRLMRNHHGTNKLAPAVDSSVSARALHTISINAQDLKEEKVTKAGQAQKLSIDKLEETIHETNASQGDIPFSGPLQVSTSSGFAWARRRRDDASIRCYSRSISRGELINGLDHSATSRSNLESKFHEKVDMLSMSRSSSKGPESSERSKVVIRNQWGKFERPDSFDTSDEYHSQDFAVALSLRDELGAKRNNLSYQDQVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRDKVELPCQTTRSSQQLCCELVKIDCQPVGKF 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 281924 287696 - Cp4.1LG20g00560.1 Cpe20g00057 486686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00057 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Cpe20g00057 695 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Cpe20g00057 695 MobiDBLite consensus disorder prediction 26 60 - -
Cpe20g00057 695 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 416 663 - -
Cpe20g00057 695 ProSiteProfiles Protein kinase domain profile. 127 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00057 695 SUPERFAMILY Protein kinase-like (PK-like) 121 414 IPR011009 -
Cpe20g00057 695 Pfam Protein kinase domain 127 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00057 695 CDD STKc_CDK9_like 127 411 - -
Cpe20g00057 695 Gene3D Phosphorylase Kinase; domain 1 114 209 - -
Cpe20g00057 695 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 52 415 - -
Cpe20g00057 695 SMART serkin_6 127 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00057 695 PANTHER CELL DIVISION PROTEIN KINASE 52 415 - -
Cpe20g00057 695 MobiDBLite consensus disorder prediction 41 57 - -
Cpe20g00057 695 Gene3D Transferase(Phosphotransferase) domain 1 210 438 - -
Cpe20g00057 695 PANTHER CELL DIVISION PROTEIN KINASE 416 663 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02414 Cpe-Chr1:20078333 Cpe20g00057 Cpe-Chr20:281924 0 dispersed
Cpe13g00969 Cpe-Chr13:8076437 Cpe20g00057 Cpe-Chr20:281924 0 dispersed
Cpe20g00057 Cpe-Chr20:281924 Cpe03g01388 Cpe-Chr3:11172333 0 dispersed
Cpe02g01045 Cpe-Chr2:9640923 Cpe20g00057 Cpe-Chr20:281924 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63063 PF00069 Pkinase 2.20E-69 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00057 - - csv:101220347 1141.72