Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00066 ATGCCTGGAAACGAAGTTGGAGACAGGGTCCACAATTTCTTTGGCCAAGAGAATTTGTACCAGGGCCAGCATCAGTCTCAGGCGGCTGATGAAGGCTGGGCTGGTCTGAATAACAACCTATGGGTTAGAAACCAGAGAGAGATCAATTCTCCTTTTATTTCAAATTTGAAGAATTATAATGCACATCAACCAGCAGATTCCGTAGGACTGGGCCAGCCTTCTCACACACTTAATGGCTTTAATTTCTCTCAATCATATATAAGTCCTGAGATTGGAAGAAGTGAATCTCAAAATCAACATCAAACTCTGAACGGTTATGCAGCAGGCCAACAACTTTTCCATGCAAGACAGGTTGAAGCGAACTTTTTTGGTTCAGATGCAGTATCTGATAGGCATATAACATCGAGAGGCCTATCTATTCATGAAGCACAAGTGAATAATCCTGAACTAAGCAAGAAAAATGTAGCTGGGTTGGAAACTACTGATTCTCCTGTAAATTTTGATTTTTTTGGAGGTCAACAGCAAATGAGCGGCAGAAATCCCAGTGTGACCCAGATTTTTCCTAAGCCGCAAACTGGGAATCCTGACATGCAGCTTCTGCAACAGCAAGCAATATTGTCACATATACAAGAACTTCAGAGGCAACGCCAATTTCAGCAGCAGGATGCAAGACAACATGGTTCGATGAATCAGACCTCATCTAACTCAAAGCTGGTAGCAGGAAACCATTCAGCCACGCTGATTGATGGTATTCCTGTTAATGAGTTATCTACCTCTCCTTGGCAGCCTGAGCATATGGGGAGCAATACAAACTCATTGCAACATAGTTTGTCTACAGCAATGCAGGGGTCCTCTAGTGGATTTGTATTTCCTTCCGAGCAGCAACAATCACTGCGCGGTTTATTTCCTGAACAAGTTGACCAGTCTTTGTATGGGATTCCTATTTCTACTGCAAGTAGTTTTCTTGGTTCAAACTCTCTCATTCCATCAGATAAACCTGCTATGCAGCAGTTAGCTGTCGGTAACAACTCCATTTCAGGGAGCCATTATACTGCATACCCAGATCAGGTTAGCATGCAAGATGGAATGGTTGTAAGACAGGATTTCCAGGGGAAAAGTATGTTTGGCATGCCTGCTAGTCAAGGTTTAAATGGTGGATTAAATTCTGAAAACCTGCAGCATGTGAATCTCCAACAGAGAAATGCATCTATGCAGGAATTTAGTAGTGGACAAGAGTTCGATAGGCCATCAGAAGTGTCGCAGGAGAAGACAATGGCACAGGTTGCTCCACCACAAAATGTGGCTACGTTAGACCCCACTGAAGAGAAGATTTTGTATGGTTCAGATGACAACTTGTGGGATGCTTTTGGGCGGAGTGATAATATTACAGCAGGTGGTTTCAACGCGCCAGATGGTAGTGATTTTAGTTCTGGATATTCCTTTTTACAGAGTGGAAGTTGGAGTGCTTTGATGCAGTCAGCCGTGGCAGAAACTTCAAGTGGGGATATGAACATTCAAGAAGGGTGGGGTGGTGTAAACTTCAATAATAGCGGGCCTCAAAATGGGAATCAGCAGCAATTAGATGCTAACGGCAGTGGAAAACTGCAATCTGTTTGGGTTGATAACAACTTGCAGACATTGAATTCTAGACATTCGTCTGTCTCTGCCGAGGCTAATAATAGGCCCAACAATTATATTAACTCAGCCAGCGTCCCTGGATTTCAGCAACCAGGTCATAAATCATTCTTTCAACAAACTGAAGGCTTTCAGAACAGTATTGCCCAAGGTTCAACTCATCCAGATGGGGAAAGAAAATGGATTGACCGTAACCTGCAACAGAAGTCATTTGCTGAAGGTCGGAATATATCTGAAAATGAAGGCAATACATCAGGTGTGGAAATAAATGCAGATCATACGTCAGGTTCTTGGCTCCGTCAACAAAGTGTATCCTCTTATAGTAGCCAAACATGTAAGCCTAATGGTTGGAGCTATAATGAACCGATGTTCTCCCATGGGGGTAGCAGTACGAAAAATCATGAGAGTCATAGCATGTCACAATCTGCTCAGGATGGAGATCATAAGCGATCTATATGTGAAGAGATGGGTTCTGCAGCTACTTTCAAGCAGAACCATGAATCAATTCCTAACCCAACTGATGAATTGCAGCATGCGAATCATGCTGTTGAGAACTCGCAGGTGTATAATGAAGGTACTAACTTCATAAATAATCGTAACCTTTCCTTTTGGAAAGATGCTAATTCTTTAGTGGACTTAAAAGAAAGCGGTTTTGTGGCAAAATACCAGCATCATCTCGATAAGGGCCCTCAAATATTTGGATCACCTGGGAATAATTGCTTAGATAAGAGTGAAATACATGAGTTTGAAAACTCAAATGCTAGTGATACACACACTTCTGGAAGCAAACAGAAAGCAGGAGGTAATATCATTCGAAAGCCATCTGTAACTCCTCGCAGATTTCAGTATCATCCAATGGGGAATTTAGACATGGATGTGGAACCTTCTTTTGGAACAAGCCATCCAACACAGACACAGGCTACTGTGCAGCAGAGCTCTCACGGATTTAAAGCCAGTGAGCTGAGTTATTTTAGGCAATCCAAATCTGGAGCAGAGGGAAATTCGAGTGAAGTTGAAAAGAGTGAAATGAGAGCCTTTGGGGATCTATCTTCTAAAAGAATGCTTCCACCTTTTGGATCTCGTTTTTCTTCTTCTTCAGATAAACTTGCTGGTCATGATCCGCGACATGTGGCCTTGCCGTCAAGCCAAAATATGCTTGAGCTTCTTCACAAAGTGGATCAACCAAGAGAACATGGTAATGCAACACATAGTCCCTCTTACCGAAATCATTCTTCTGAAATGGGTGAAGCAGAAACTTCTGATGGATCAGTTGGTCAAACACCACGAAATCAGTCCTCTGATTCTCAAGTTTTTGGTTTGCAACTGGGTCTCCCTCAACGGTTGGCCATGCAGGATGCTGCGTTATCTTCTCATTGTTCCTCGCCTATGGTTATGAGTTCAACCCATTCTAGCTCTGATACAGGAGAACGTGGTCATATGTTGTTGCCTCCTGTAGCCTCTAACCAGAGGGATTTGAGAAATAATATAACCGGTTCTTCTGGACATAGTGGCAATAAAATCCCTCATATCAATGCTCAAGGAAACTTGGTTGCAGGTTCTCAATCTGCCTTTCCTTATCCTAGAAGTCATCTTCAAAATCAGCACCTTATTGCCAATCACTCTGCTAGTGTGTTTTCAGATAAAATTGGTATTCATTCAAGAAATTTTGAAGACTCTTCTGAGCGAGTAGAAAATAGTCAAATGGTGTCAACAGATATTTCCAAAAGTGGTCTCCAAATGAACCTAGTTTCTTCTGCTGACACATCTCAGCAAAGCAGTGGTGTTGTATCTAATGCACAAAATCCCCCCCAGCTTGCCCAGGAATTGGGTTCTGTGCCTATATCCCAACGGGCCGCTTTCTCAAAAATCCCTCCTAATGAGTGGGCAAATCTCACAACCCAGAAACACTCGCTACACATGGATCCTTCAAAAGCTGCCTCAGTTTTGTTCAAATCTCATATGCATATGGACAATTTAGACAAGAGTTTTTCAGGACTAAAAAACTTGGATACTCGAGAGAAATTGGAACATGAGGCTTTGGCCCCTGGTGAAAATTCCATCAATATGCAAAATATTATTGGAAGAGAAGAGCAAATGCAAGAAAGCCCTGGAAAACAAGTTTCAGGTGGGAAGAGTGAAATTTCCCCGCAGGCTACAAGTGCATCAGGTGGACTGGAATCTGCTGGGCATCACTCATTAAGTGTATCTCCATCAAATTCTATGGCTACTCGAGTTAATATTGACACTTCAGGTTATTCTCTACATCCAAATATTAGTTCGCAGCAGAATTACCCCTTAATGCATCAAACGCAGGCCATGAAAAGTGCTGATAATGACCCAACGAACAGGAATGGGAAGAGATTTAAAGGTCCAGATTGTGGTTTAGATTCTCAGCATGTTGCCATGGATGGGGGTCAACTTTTATCACATGAACACAGTAATGCTGTCAGAGAGTCATTACTTAACCATGCTTCCATTTCATGTGTAGATGCAGCAGCGGTAGATTTTTCATCAAAGAAGGGGGATGCCTCTGTATCATCTACTATTGACAGTGCATCTTGCGTGAGGAGCGAGCATTCTCAAATCAGTCCTCAGATGGCTCCATCTTGGTTTGATCAATATGGAACTTTTAAAAATAGACAGACTTTATCAGTATTTCCTGGATCCAACAATGCAGCCATGAAGCCTTTGGATCAATCTTTGATTGTTGAAAAGCCTCCTGATGGCTTCAATGCTCAAAATCCTGTGAAGCAAGCAAATGCTTCTGCTGATGGTAGTGAGCACAATAGTGAACGGGAAAGTTCAACTCTCATGTCGATAGAACACAGAAATTTCTCTTTAGGTCAACCATTGCCACTTGATTTCATCAATCAAAGTTTGGCTGCTGTAAGACTCAAAAAGCGCAAAAGCTCTGCACCTGAACTGTTTCCATGGAACGAAGAAATGACTCAAAGTTGTAGAAGACTGCAGGATATAAGCATGGCGGATGTTGATTGGGCTCAGGCAACCAACCGGCTGATTGAGAAGAAAGAAGATGAAGTTGAAATGATGGATGATGGACTAATGATAAAACTGAAGAGGAGGCTTAACTTGACTACGCTGCTTGTTCAACAACTCCTCCGTCCTCCTACTTTTACTACTCTCTCTTCAGATGCCAGCCTACATTATGAGAGTGCGGCTTACCTTGTTGCAAGGCTAGCTTTGGGGGATGCTTGTAATATAGTTTCTTCCACAGGAGCTGATATTGCGTTGCATCCAGAAAGCAGAAATCCCCTTTCTGAGGGACTTAAAGTAACTGGTAAAACTGGTGATCATCAAATTATAGAAGTTGTGGAGGCGTTCATGAAACGAGCACAGAAGATGGAAGATGATTTATTGAGAGTGGAGAAGAGAGCTTCAATCTTAGATTTGAGAGTGGAATGCCAGGATCTTGAAAAGTTCTCTGTTATCAATCGGTTTGCCAAGTTTCATAGCCGAGGACAAGTTGATGGGGGTGAGGCCTCATCATCCTCTGATGTGACCACAAGTACTCAGAAATCTTGCCCCCAGAGATATGTTACTGCACTTCCCATTCCTAGAAATCTTCCTGACAGGGTACAATGTCTCTCACTTTAA 5250 42.48 MPGNEVGDRVHNFFGQENLYQGQHQSQAADEGWAGLNNNLWVRNQREINSPFISNLKNYNAHQPADSVGLGQPSHTLNGFNFSQSYISPEIGRSESQNQHQTLNGYAAGQQLFHARQVEANFFGSDAVSDRHITSRGLSIHEAQVNNPELSKKNVAGLETTDSPVNFDFFGGQQQMSGRNPSVTQIFPKPQTGNPDMQLLQQQAILSHIQELQRQRQFQQQDARQHGSMNQTSSNSKLVAGNHSATLIDGIPVNELSTSPWQPEHMGSNTNSLQHSLSTAMQGSSSGFVFPSEQQQSLRGLFPEQVDQSLYGIPISTASSFLGSNSLIPSDKPAMQQLAVGNNSISGSHYTAYPDQVSMQDGMVVRQDFQGKSMFGMPASQGLNGGLNSENLQHVNLQQRNASMQEFSSGQEFDRPSEVSQEKTMAQVAPPQNVATLDPTEEKILYGSDDNLWDAFGRSDNITAGGFNAPDGSDFSSGYSFLQSGSWSALMQSAVAETSSGDMNIQEGWGGVNFNNSGPQNGNQQQLDANGSGKLQSVWVDNNLQTLNSRHSSVSAEANNRPNNYINSASVPGFQQPGHKSFFQQTEGFQNSIAQGSTHPDGERKWIDRNLQQKSFAEGRNISENEGNTSGVEINADHTSGSWLRQQSVSSYSSQTCKPNGWSYNEPMFSHGGSSTKNHESHSMSQSAQDGDHKRSICEEMGSAATFKQNHESIPNPTDELQHANHAVENSQVYNEGTNFINNRNLSFWKDANSLVDLKESGFVAKYQHHLDKGPQIFGSPGNNCLDKSEIHEFENSNASDTHTSGSKQKAGGNIIRKPSVTPRRFQYHPMGNLDMDVEPSFGTSHPTQTQATVQQSSHGFKASELSYFRQSKSGAEGNSSEVEKSEMRAFGDLSSKRMLPPFGSRFSSSSDKLAGHDPRHVALPSSQNMLELLHKVDQPREHGNATHSPSYRNHSSEMGEAETSDGSVGQTPRNQSSDSQVFGLQLGLPQRLAMQDAALSSHCSSPMVMSSTHSSSDTGERGHMLLPPVASNQRDLRNNITGSSGHSGNKIPHINAQGNLVAGSQSAFPYPRSHLQNQHLIANHSASVFSDKIGIHSRNFEDSSERVENSQMVSTDISKSGLQMNLVSSADTSQQSSGVVSNAQNPPQLAQELGSVPISQRAAFSKIPPNEWANLTTQKHSLHMDPSKAASVLFKSHMHMDNLDKSFSGLKNLDTREKLEHEALAPGENSINMQNIIGREEQMQESPGKQVSGGKSEISPQATSASGGLESAGHHSLSVSPSNSMATRVNIDTSGYSLHPNISSQQNYPLMHQTQAMKSADNDPTNRNGKRFKGPDCGLDSQHVAMDGGQLLSHEHSNAVRESLLNHASISCVDAAAVDFSSKKGDASVSSTIDSASCVRSEHSQISPQMAPSWFDQYGTFKNRQTLSVFPGSNNAAMKPLDQSLIVEKPPDGFNAQNPVKQANASADGSEHNSERESSTLMSIEHRNFSLGQPLPLDFINQSLAAVRLKKRKSSAPELFPWNEEMTQSCRRLQDISMADVDWAQATNRLIEKKEDEVEMMDDGLMIKLKRRLNLTTLLVQQLLRPPTFTTLSSDASLHYESAAYLVARLALGDACNIVSSTGADIALHPESRNPLSEGLKVTGKTGDHQIIEVVEAFMKRAQKMEDDLLRVEKRASILDLRVECQDLEKFSVINRFAKFHSRGQVDGGEASSSSDVTTSTQKSCPQRYVTALPIPRNLPDRVQCLSL 1749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 324576 332529 - Cp4.1LG20g00640.1 Cpe20g00066 486695

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 998 1022 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 796 859 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 842 859 - -
Cpe20g00066 1749 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1 1749 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 668 692 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 941 981 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 944 981 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 1450 1482 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 896 920 - -
Cpe20g00066 1749 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1 1749 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 1243 1285 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 215 236 - -
Cpe20g00066 1749 Coils Coil 1656 1676 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 616 636 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 1708 1724 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 510 530 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 668 685 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 1705 1724 - -
Cpe20g00066 1749 MobiDBLite consensus disorder prediction 998 1020 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00066 - - - mcha:111008857 2776.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00985 Cpe-Chr13:8138768 Cpe20g00066 Cpe-Chr20:324576 1.17E-09 dispersed
Cpe02g01033 Cpe-Chr2:9562555 Cpe20g00066 Cpe-Chr20:324576 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g640 Blo04g00787 Blo16g00173 . . . Bpe13g00307 Bma06g00157 . Cmo13g01131 . . . . . . Cpe20g00066 . . . . . . . . . . . . . . . Cone2ag0816 Cone16ag0198 Cone13ag0041 Cone19ag0047 Lsi02g00108 Csa01g00588 Chy12g01510 Cme12g01954 . . Bda11g01717 Bda14g00869 . Bpe15g00586 Bma03g00846 . Sed08g2109 . . Cma13g01082 . Car13g00920 . . . Bhi08g01103 Tan05g2375 Cmetu12g1694 Lac10g0137 . . . Cla04g01165 Cam04g1224 Cec01g1735 Cco01g1781 Clacu04g1251 Cmu04g1229 Cre01g1525 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003705 2 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 4 2 1 46