Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00081 ATGACAGGAAGAGTAAATAATATGATCTCAAAATTGAAGCAAGAGGGCGTTCATGTTGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGGGCCTTCAAGGCAAGGGCCATTTCTTAGAGGCAATCCAAGAATTTTTAGAGTTTCTCCTTTGTTTGGAGGAAAAGACAGGCACAGCAAAGTTTGCACAATGAAGGGCTTACGAGACAGAAGGATTAGGCTTTCAGCTCCCACTGCTATTCAACTTTATGATTTGCAGAACAGACTTGGCCTCAGCCAACCCAGCAAAGTCATAGACTGGCTGATTGATGTCACAAGATTTGATATTGATAAGCTTCCACCACTCCATTTTCCAAAAGATTTTGACCCAAATGCCTCGTTTCTTCATCATCTTGATATTGCAGATGCTACAGCGAAGGCCAAACATGAAGAAACTGGGATGCTTTTGCTTCAGAAGTTGTCTCCTTCACCCAACCATGCTTCTTTTTCTGCTCTTCAGCTTCAAACCAACGCCATGACTGAAAACTGTTGCCATTTTGACCCTCCAAGCTTTCCATTCCCATTAATGGATCAGGCCAATCCAGCTTCATTTTCCTCGCCTTCTGAGCAGTTGCTGTTCCGTCCAATGACGGTGCCACCCGAAGTTTCTTCTTACCTTCCTAACGGTGGAAATTAA 675 43.56 MTGRVNNMISKLKQEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRFDIDKLPPLHFPKDFDPNASFLHHLDIADATAKAKHEETGMLLLQKLSPSPNHASFSALQLQTNAMTENCCHFDPPSFPFPLMDQANPASFSSPSEQLLFRPMTVPPEVSSYLPNGGN 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 421585 422259 + Cp4.1LG20g00780.1 Cpe20g00081 486710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00081 224 MobiDBLite consensus disorder prediction 1 40 - -
Cpe20g00081 224 Pfam TCP family transcription factor 54 124 IPR017887 -
Cpe20g00081 224 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 135 IPR005333 GO:0003700
Cpe20g00081 224 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Cpe20g00081 224 MobiDBLite consensus disorder prediction 15 32 - -
Cpe20g00081 224 PANTHER TRANSCRIPTION FACTOR TCP17 9 135 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe18g00710 Cpe20g00081 CCT
Cpe04g01456 Cpe20g00081 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01456 Cpe-Chr4:11614584 Cpe20g00081 Cpe-Chr20:421585 6.30E-41 dispersed
Cpe19g01146 Cpe-Chr19:7689983 Cpe20g00081 Cpe-Chr20:421585 1.73E-24 dispersed
Cpe18g00710 Cpe-Chr18:7003353 Cpe20g00081 Cpe-Chr20:421585 7.50E-42 wgd
Cpe02g01404 Cpe-Chr2:12257575 Cpe20g00081 Cpe-Chr20:421585 2.43E-34 wgd
Cpe20g00081 Cpe-Chr20:421585 Cpe03g00977 Cpe-Chr3:7885521 2.04E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51091 PF03634 TCP 2.00E-23 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00081 - - cmax:111495302 452.595