Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00084 ATGTCTTTAGAGCATGAATTTCTGTTTGTTCCAGCATCTGGGTTTGCCTCAACAATGGCAAATAATGTGAATCTCTTTCTTTGTTTTCTTCTCTTTGTGGCTGTTTTTGGCCTTTGCCTTAGCCCCGGTGGTCTAGCTTGGGCTCTGGTTTCAAGGCCAAGAAACAAACCCATCATTCCTGGCCCTTGTGGCACTCCTTTTTTAGGTCAAGTTTTTACCTTTACTACTTCTCTCACTCATAGAGCTCTTGCCAACCTCGCTCATACCTTAAAGGCCAAATCTTTGATGTCATTCTCTGTTGGGTTCACTCGTTTTGTGATTTCTAGCAACCCCATCACTGCCAAAGAGCTTTTGAACAGCTCGGCGTTTGCTGATCGTCCCATTAAGGAGTCAGCTTACGAGCTTTTGTTCCATAGAGCAATGGGGTTCGCTCCATATGGGGAGTATTGGAGGAACCTTAGGAGAATCTCAGCCACTCATTTGTTTAGCCCCAAAAGGATATCTAATTTTGGGGAATTGAGGCAGAGAATTGGGGTTGAAATGGTGGGGGAAATTAAGGGTTTGATGGAAAAAAATGGGGAAATTGAAGTGAGGAAGGTTTTGCATTTTGGGTCGTTGAATAATGTTATGGGGAGTGTGTTTGGGAAAAGGTATGAGTTTTTTGGTGATGGTGGGAGTAATTGTGAGGTTGAGGGATTGGTGAGTGAAGGGTATGATTTGCTTGGGAGTTTCAATTGGAGTGATCACTTCCCTGTTTTGGGTTGGTTGGATTTGCAAGGCGTGAGAAAAAGGTGTAAAATTTTGGTGGGGAAAGTGAATGTTTTTGTTGGGAAAATCATAGAAGATCATAGAATGAATAGAAAAGGAAAGGGTGTTGTTGTTCATAATGATAATGATAATGATAATGATAATGATAATGATGATGAAGATGATGACACCAAATCTGGAGATTTCGTTGATGTATTGCTTGATTTGGAAAAGGAAAACAAGCTCACCGACTCTGACATGATTGCTGTGTTATGGGAAATGATCTTCCGAGGAACAGACACGGTGGCGATTCTCCTAGAATGGATATTAGCCAGAATGGTTCTTCATCCCGACATCCAATCCAAACTCCAATCGGAAATCGACCGCGTTGTTATACCCGGTCGGAATGTCTCCGATTCCGACCTCCCAAATCTCCCTTATCTCCATGCAGTCGTTAAAGAGACACTAAGAATCCACCCTCCTGGCCCACTTCTCTCGTGGGCCCGCCTCGCCATCCACGACACCCACGTCGGCGCTCATTTCATTCCCGCCGGTACTACGGCGATGGTCAACATGTGGGCCATAACCCACGACGAACATATCTGGTCCGACCCGACAACATATGACCCGGAGAGGTTCATTAAAGAGGAGGTGCCTATAATGGGGTCTGACTTACGGCTAGCACCGTTTGGATCTGGAAGACGGGTGTGCCCTGGGAAAGCCATGGGGTTAGCCACTGTGGAGCTTTGGCTAGCTCAGTTGGTTCAGAGGTTCAAATGGGTTCAGGTGGATGGTGGGTGTGGAAATGGCGTGGACTTGTCTGAGTGTTTGAAGCTGTCGCTGGAGATGAAACAGCCTTTGATCTGTAGGGCTGTTCCGAGGTTTTAG 1635 45.75 MSLEHEFLFVPASGFASTMANNVNLFLCFLLFVAVFGLCLSPGGLAWALVSRPRNKPIIPGPCGTPFLGQVFTFTTSLTHRALANLAHTLKAKSLMSFSVGFTRFVISSNPITAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFSPKRISNFGELRQRIGVEMVGEIKGLMEKNGEIEVRKVLHFGSLNNVMGSVFGKRYEFFGDGGSNCEVEGLVSEGYDLLGSFNWSDHFPVLGWLDLQGVRKRCKILVGKVNVFVGKIIEDHRMNRKGKGVVVHNDNDNDNDNDNDDEDDDTKSGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQSKLQSEIDRVVIPGRNVSDSDLPNLPYLHAVVKETLRIHPPGPLLSWARLAIHDTHVGAHFIPAGTTAMVNMWAITHDEHIWSDPTTYDPERFIKEEVPIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVQRFKWVQVDGGCGNGVDLSECLKLSLEMKQPLICRAVPRF 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 447622 449886 + Cp4.1LG20g00710.1 Cpe20g00084 486713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00084 544 MobiDBLite consensus disorder prediction 291 313 - -
Cpe20g00084 544 SUPERFAMILY Cytochrome P450 59 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 Gene3D Cytochrome P450 48 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Cpe20g00084 544 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 543 - -
Cpe20g00084 544 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS E-class P450 group I signature 440 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PANTHER CYTOCHROME P450 78A7-RELATED 8 543 - -
Cpe20g00084 544 Pfam Cytochrome P450 60 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe20g00084 544 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00587 Cpe-Chr9:4078957 Cpe20g00084 Cpe-Chr20:447622 0 dispersed
Cpe11g00395 Cpe-Chr11:2181854 Cpe20g00084 Cpe-Chr20:447622 1.57E-48 dispersed
Cpe11g00396 Cpe-Chr11:2182571 Cpe20g00084 Cpe-Chr20:447622 1.42E-129 dispersed
Cpe12g00430 Cpe-Chr12:3286711 Cpe20g00084 Cpe-Chr20:447622 1.23E-175 dispersed
Cpe16g00059 Cpe-Chr16:829107 Cpe20g00084 Cpe-Chr20:447622 1.64E-164 dispersed
Cpe17g00404 Cpe-Chr17:3008182 Cpe20g00084 Cpe-Chr20:447622 1.48E-109 dispersed
Cpe20g00084 Cpe-Chr20:447622 Cpe03g00440 Cpe-Chr3:2502016 7.07E-75 dispersed
Cpe20g00084 Cpe-Chr20:447622 Cpe07g00092 Cpe-Chr7:446237 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00084 K20619 - csv:101203458 832.787