Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00091 ATGAAAGGGAATCAGATTGTTAAAGTTAAATCCACGCCTTTTTCCTCGGCAATCCAATTCACGCCGCCATTTTCATCTCTCTCTCTATCTCTCTCCTCTCCCATTTGCCTTCTTCTCTCAATCCGAGAGAAGGAGAAACTAATGGCGACAAAATCCGAGAAATTTTCAGCTGATTTTGTGATGGGTGGTGTCGCCGCGATTGTCGCTAAAAGTGCAGCGGCGCCGATTGAAAGGGTCAAGCTTCTGTTGCAGAATCAGGGAGAGATGATAAAGAGAGGGCATCTTAAGAAGCCATATCTGGGCATTCATGACTGTTTCAGAAGAGTGTTGAGAGAAGAAGGGCCGTTGTCACTATGGAGGGGAAATCAGGCTAACGTTATTCGATATTTCCCTACTCAGGCTTTCAACTTTGCATTCAAAGGTTACTTCAAAACGAAATTCGGGCGCTCAAAAGAGAAGGATGGATACATCAAGTGGTTTGCTGGAAATGTTGCTTCAGGAAGTGCTGCAGGAGCAACTACATCGTTTTTTCTGTATCATTTGGATTATGCACGCACTCGACTAGGCACCGATGCAACGGACGGTGGCAGTAACAGCCAGCGCCAATTTAAAGGGTTGCTGGATGTCTACAGAAAAACCTTGTCAAGTGATGGAATTGTTGGTCTATACCGAGGATTTAGTGTTTCAATTGTGGGAATTACTCTGTATAGGGGCATGTATTTTGGGATTTACGACACTTTGAAGCCTCTTGTTCTTGTTGGGCAGTTTGAGGGGAACTTTTTTGCTAGTTTCTTATTGGGGTGGAGTATCACAACCTTTTCTGGGGTATGCGCTTATCCTTTCGACACGCTGCGACGAAGAATGATGCTTACCTCTGGACAAACCCTGAAGTACCGCAGTGCTTTACATGCATTTTCCGAGATCATTCGCCATGAGGGTATTGCTGCTCTTTTTCGAGGAGTCACTGCCAATATGCTTGTTGGTGTTGCAGGGGCTGGTGTTCTTGCAGGTTATGATCAACTGCACGAAATTGCATGTCGACATGGTTACTCCTATGGCGGGCAACAACATCAAATAGCCTCGAAATGA 1089 45.27 MKGNQIVKVKSTPFSSAIQFTPPFSSLSLSLSSPICLLLSIREKEKLMATKSEKFSADFVMGGVAAIVAKSAAAPIERVKLLLQNQGEMIKRGHLKKPYLGIHDCFRRVLREEGPLSLWRGNQANVIRYFPTQAFNFAFKGYFKTKFGRSKEKDGYIKWFAGNVASGSAAGATTSFFLYHLDYARTRLGTDATDGGSNSQRQFKGLLDVYRKTLSSDGIVGLYRGFSVSIVGITLYRGMYFGIYDTLKPLVLVGQFEGNFFASFLLGWSITTFSGVCAYPFDTLRRRMMLTSGQTLKYRSALHAFSEIIRHEGIAALFRGVTANMLVGVAGAGVLAGYDQLHEIACRHGYSYGGQQHQIASK 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 483199 485230 - Cp4.1LG20g00850.1 Cpe20g00091 486720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00091 362 Gene3D Mitochondrial carrier domain 56 350 IPR023395 -
Cpe20g00091 362 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 48 355 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe20g00091 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 158 250 IPR018108 -
Cpe20g00091 362 SUPERFAMILY Mitochondrial carrier 53 341 IPR023395 -
Cpe20g00091 362 PRINTS Mitochondrial carrier protein signature 267 289 IPR002067 GO:0055085
Cpe20g00091 362 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Cpe20g00091 362 PRINTS Mitochondrial carrier protein signature 71 85 IPR002067 GO:0055085
Cpe20g00091 362 PRINTS Mitochondrial carrier protein signature 223 241 IPR002067 GO:0055085
Cpe20g00091 362 PRINTS Mitochondrial carrier protein signature 121 141 IPR002067 GO:0055085
Cpe20g00091 362 PRINTS Mitochondrial carrier protein signature 58 71 IPR002067 GO:0055085
Cpe20g00091 362 Pfam Mitochondrial carrier protein 259 344 IPR018108 -
Cpe20g00091 362 Pfam Mitochondrial carrier protein 159 251 IPR018108 -
Cpe20g00091 362 Pfam Mitochondrial carrier protein 53 149 IPR018108 -
Cpe20g00091 362 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 48 355 - -
Cpe20g00091 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 53 146 IPR018108 -
Cpe20g00091 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 258 344 IPR018108 -
Cpe20g00091 362 PRINTS Adenine nucleotide translocator signature 158 171 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe20g00091 362 PRINTS Adenine nucleotide translocator signature 263 279 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe20g00091 362 PRINTS Adenine nucleotide translocator signature 55 67 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe20g00091 362 PRINTS Adenine nucleotide translocator signature 99 120 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe20g00091 362 PRINTS Adenine nucleotide translocator signature 132 144 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00091 Cpe-Chr20:483199 Cpe19g00284 Cpe-Chr19:2463955 5.04E-06 dispersed
Cpe15g00812 Cpe-Chr15:8106468 Cpe20g00091 Cpe-Chr20:483199 1.11E-134 transposed
Cpe17g00683 Cpe-Chr17:5467714 Cpe20g00091 Cpe-Chr20:483199 7.92E-12 transposed
Cpe20g00091 Cpe-Chr20:483199 Cpe09g01157 Cpe-Chr9:9841409 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00091 K05863 - csv:101207715 552.747