Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00099 ATGGGCGGTGGTAGAAGACGAAGGAAACAGCATTTCAGAAGGATTCATGCCTTTCCTTGTGGTAGAGCATCATTCAAAGATGAACAGTCATTAATTGGAGGGCCAGGGTTCTCAAGGGTAGTTTACTGTAACGATCCAGATGGTTTTGAGGCGAGTCTTCTCAACTATGGAGGCAATTATGTCAAAACTTCAAAGTATACTATTGCTTCATTCTTCCCCAGATCCTTGTTTGAGCAATTCAGAAGGGTTGCCAATTTGTATTTCCTCCTTTGTGCTTTGCTTGCCTTTAGCCCTCTCTCGCCTTATTCGCCCATCAGTAATGTTCTTCCTCTTCTTCTTGTTATTGGTGTCACCATGGGCAAAGAGGGTGTTGAAGATTGGAGGCGAACCAAACAGGACATGGAGATGAATAACAGGATAGTGAAAGTACATATTCAAGAGGGTGAGTTTGTTGAGACTAAATGGATGGACTTGAAAGTTGGGGACGTGGTTAAGGTGGAGAAGGATGAATTCTTCCCTGCTGATCTCATTTTACTGTCGTCGAGTTACGAGGAAGCGATTTGCTATGTCGAGACGATGAATCTTGATGGCGAAACGAATTTGAAGCTAAAGAATGCATTAGAAGCAAGCTCGAACTTCCACGAGGATTCGAGCTTTAAGAATTTCAAGGCTGTAATAAAATGTGAAGACCCCAATGCAAATTTGTATTCCTTTGTGGGAAGTATGGAGCTTGAAGAACAGCAACACCCTCTCAGCCCTCAGCAGCTTCTTCTTCGTGACTCGAAGCTGCGAAACACGGATTTTATATACGGGGTCGTGATCTTCACGGGTCATGATACGAAGGTTATTCAGAACTTAACAGCTCCTCCTTCCAAGAGAAGCAAGATTGAGAAGAGGATGGATAAGATTGTGTTCTTCCTGTTTGCTGTTTTGGTTTTAATATCAATTGCTGGGTCGATTTTTTTCGGAGTTTCGACTAGGGACGATATAGAGAACGGAAGAGCTACGAGATGGTACCTTAGGCCAGACGATACCACAATATATTACAATCCCAAAAACGCTCCAGCTGCGGCAATATTGCAGTTTTTGACAGCTCTGATGCTTTTTAGCTATTTGATTCCCATATCATTGTATGTGTCCATTGAAATTGTCAAAGTTCTGCAGAGTGTCTTCATCAACCAAGATCTTCACATGTACCATGAGGAAACTGATAAGCCAGCTCGTGCTCGTACCTCGAATTTGAATGAAGAGCTTGGCCAAGTTGACACCATTCTTTCTGATAAAACCGGGACATTGACCTGCAATTCAATGGAGTTCATCAAGTGTTCGGTGGGCGGGACTGCTTACGGACGAGGAATTACAGAAATAGAGAGAGCTCTTGCAAGACGAAAGGAATCAACTTTACCTGAAAATTTAGAGGCCAACATTGCACGTCTTAGCAGCGAAAAACCGTTCATTAAGGGGTTCAATTTCAAGGACGAAAGAATAATGGATGGTAATTGGGTGAACGAGCCTCGAGCCGATGTAATCCAGAAGTTCCTACAGCTTCTTGCTATCTGTCATACTGCATTGCCAGAAATTGATGAGGAAACAGGAAACATTTCATATGAAGCTGAATCACCAGACGAGGCAGCTTTTGTGATTGCAGCCAGAGAATTTGGATTCGAGTTCTATGAACGGACTCAGACAAGCATTTCGTTGCGGGAGTTCGATCCAACCTCGGCCCGAAAAGTTGAAAGATCATATCAACTCCTGGATGTTTTGGAATTTAATAGCACAAGAAAACGGATGTCTGTGATTGTAAGAGATGCACAGGGACAGCTACTACTACTCTGTAAAGGAGCTGACAGTGTTATGTTTGAAAGACTTGCAAAGAATGGAAGTGAGTTTGAAGAACAGACAAAGGTGCACATCAATGAGTACGCCGATGCCGGTTTAAGAACTTTGGTTCTAGCGTACCGTGAGCTGAAAGTGGAGGAGTTTAATAAATTTCATCAAGAATTCATGAAAGCCAAGAACACAGTGAGCACGGATCGTGACGACACCATCGATCGGTTAACAGAAAGCATCGAGAAAGATTTGATTCTTCTTGGTGCTACAGCAGTTGAAGATAAACTTCAAAATGGGGTCCCTGAATGCATTGACAAGCTTGCTCAGGCTGGTATAAAAATATGGGTGCTGACTGGTGATAAAATGGAAACAGCCATCAACATTGGCTTTGCTTGTAGTTTACTTAGGCAAGGAATGAGGCAAATCACTATCAGCTCAGAGACTGTGGAAGGAAAAGCTCTAGACCAAGTTGAAGAGGTTCACAAATCTGCAGCTATCAAGGCGTTTAAGGAAAGCGTGACTCGACAAATAACCGACGCAAAAGCATTACTTGCATCTTCAAGCAAAACCCCGGAAGCGTTGGCTTTGATAATTGATGGAAAGTCGCTCACCTACGCTCTGGAGGACGATGTGAAAAACTTATTTCTGGAGCTTGCCATTGGCTGTGCTTCAGTTATCTGCTGCAGATCATCTCCTAAACAGAAAGCACAAGTTACCCAATTGGTTAAGGTCAAAACAGGTAGCACCACTCTAGCAGTCGGTGATGGTGCAAACGACGTCGGGATGCTTCAAGAAGCGGATATCGGGATTGGTATTAGCGGTGTAGAAGGGATGCAGGCAGTCATGTCGAGCGACATTGCCATAGCACAGTTTCGATATTTGGAGCGGTTGCTCCTTGTGCATGGACATTGGTGTTACAGGAGAATCTCTTCCATGATATGCTATTTCTTCTACAAGAACATTGTTTTTGGGTTCACTCTCTTCTTCTTTGAGTTGTATGCATCATTCTCCGGCCAATCTGTATTCGATGACTGGTTCCTTTCGCTGTATAACGTCTTCTTTACGTCTCTCCCTGTGATCGCATTGGGAGTATTCGACCAGGACGTTTCATCCCGCCACTGTCTCAAGTTCCCACTTTTATACCAAGAAGGTGTCCAAAACGTGTTGTTTAGTTGGGTTCGAGTTATCGGTTGGGTGTTCAACGGGCTACTAAGTTCTATCATCATCTTCTTCTTTTGTGTCGGGGCAATCGAATATCAAGCTTTCCGCAGCAGTGGAGAGGTCGTCGGGTTGGAAATTCTGGGCGTCACCATGTACACTTGTGTCGTCTGGGTTGTAAACTGTCAAATGGCATTGTCAATCAGTTACTTCACATATATCCAACATCTCTTCATCTGGGGCAGCATCATTCTCTGGTACTTATTCCTCATGGCATATGGAGCTATAAACCCAACCATATCAACCACTGCATTTCAGGTCTTCGTCGAGGCCTGCGCCCCGGCGCCATCGTTTTGGATCCTCACACTATTAGCACTGGGAGCTTCCCTTCTCCCATACTTCATCTACGCATCCATCCAAATGCGATTCTTCCCAATGAATCATCAAATGATTCAATGGATAAAAGCCGATGGGCACGCGAACGACCCAGAATACTGTCAAGTAGTGAGACAACGATCGTTACGACATACAACCGTCGGTTACACAGCTCGGTTCAAAGCATCAAAGCATCTTAGAGAAATCCCAGAAAGCAACAACCATTAG 3591 44.03 MGGGRRRRKQHFRRIHAFPCGRASFKDEQSLIGGPGFSRVVYCNDPDGFEASLLNYGGNYVKTSKYTIASFFPRSLFEQFRRVANLYFLLCALLAFSPLSPYSPISNVLPLLLVIGVTMGKEGVEDWRRTKQDMEMNNRIVKVHIQEGEFVETKWMDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETMNLDGETNLKLKNALEASSNFHEDSSFKNFKAVIKCEDPNANLYSFVGSMELEEQQHPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVIQNLTAPPSKRSKIEKRMDKIVFFLFAVLVLISIAGSIFFGVSTRDDIENGRATRWYLRPDDTTIYYNPKNAPAAAILQFLTALMLFSYLIPISLYVSIEIVKVLQSVFINQDLHMYHEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEIERALARRKESTLPENLEANIARLSSEKPFIKGFNFKDERIMDGNWVNEPRADVIQKFLQLLAICHTALPEIDEETGNISYEAESPDEAAFVIAAREFGFEFYERTQTSISLREFDPTSARKVERSYQLLDVLEFNSTRKRMSVIVRDAQGQLLLLCKGADSVMFERLAKNGSEFEEQTKVHINEYADAGLRTLVLAYRELKVEEFNKFHQEFMKAKNTVSTDRDDTIDRLTESIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMRQITISSETVEGKALDQVEEVHKSAAIKAFKESVTRQITDAKALLASSSKTPEALALIIDGKSLTYALEDDVKNLFLELAIGCASVICCRSSPKQKAQVTQLVKVKTGSTTLAVGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFFELYASFSGQSVFDDWFLSLYNVFFTSLPVIALGVFDQDVSSRHCLKFPLLYQEGVQNVLFSWVRVIGWVFNGLLSSIIIFFFCVGAIEYQAFRSSGEVVGLEILGVTMYTCVVWVVNCQMALSISYFTYIQHLFIWGSIILWYLFLMAYGAINPTISTTAFQVFVEACAPAPSFWILTLLALGASLLPYFIYASIQMRFFPMNHQMIQWIKADGHANDPEYCQVVRQRSLRHTTVGYTARFKASKHLREIPESNNH 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 522155 529921 - Cp4.1LG20g01050.1 Cpe20g00099 486728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00099 1196 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Cpe20g00099 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe20g00099 1196 SFLD C1.7: P-type atpase like 409 914 - -
Cpe20g00099 1196 CDD P-type_ATPase_APLT_Dnf-like 58 1023 - -
Cpe20g00099 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Cpe20g00099 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1187 - -
Cpe20g00099 1196 Pfam E1-E2 ATPase 136 360 - -
Cpe20g00099 1196 Gene3D - 542 697 IPR023299 GO:0000166
Cpe20g00099 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 829 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe20g00099 1196 Pfam Cation transport ATPase (P-type) 535 623 - -
Cpe20g00099 1196 SFLD p-type atpase 409 914 IPR044492 -
Cpe20g00099 1196 Gene3D - 698 903 IPR023214 -
Cpe20g00099 1196 SUPERFAMILY HAD-like 420 918 IPR036412 -
Cpe20g00099 1196 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Cpe20g00099 1196 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Cpe20g00099 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 496 699 IPR023299 GO:0000166
Cpe20g00099 1196 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 1187 - -
Cpe20g00099 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 1141 IPR023298 -
Cpe20g00099 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Cpe20g00099 1196 SUPERFAMILY Calcium ATPase, transduction domain A 144 285 IPR008250 -
Cpe20g00099 1196 Gene3D - 118 287 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00277 Cpe-Chr1:1568832 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe01g00880 Cpe-Chr1:5169306 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe01g01379 Cpe-Chr1:8291914 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe01g01425 Cpe-Chr1:8552645 Cpe20g00099 Cpe-Chr20:522155 7.33E-74 dispersed
Cpe01g01426 Cpe-Chr1:8567392 Cpe20g00099 Cpe-Chr20:522155 9.68E-08 dispersed
Cpe12g00609 Cpe-Chr12:6053066 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe13g00024 Cpe-Chr13:204020 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe15g00815 Cpe-Chr15:8121112 Cpe20g00099 Cpe-Chr20:522155 1.34E-139 dispersed
Cpe17g00475 Cpe-Chr17:3536107 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe19g00155 Cpe-Chr19:1247702 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe20g00099 Cpe-Chr20:522155 Cpe09g00258 Cpe-Chr9:1499250 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00099 K01530 K14802 csv:101209427 2178.29