Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00144 ATGCTGGAATTCAGTGGCGGAGAGCTGAATCAGAACCGAGGAAGGCGACCGCTGGTTTTGTACGGTGAGCGCAATTCTTGTGGTCGATGTTGTCTTTGGTTTTACTGCCGCATTTCTATCGGTTTGATACATATTGAAATCGAATTGACGTTAATCGACGCTATCATGGATCGATTCAATAAGCTGCTGATTGTTCTGCAGGATGATAAGCAATCAGACTTTTTCACAGAGTATGGCGAAGCAAGCCGATACCAAATTCAAGAAGTTGTTGGGAAAGGAAGCTACGGAGTTGTTGGTTCTGCAATTGATAGCCAGACGGGTGAGAGAGTTGCCATCAAGAAAATTAATGATGTTTTTGAGCATGTATCTGATGCCATACGCATCCTCAGAGAAATTAAGCTTCTTCGGATGCTTCATCATCCGAATATTGTAGAGATAAAACATATTATGCTTCCTCCATCACAACGAGAATTCAAAGATATATATCTCGTTTTTGAGTTGATGAAGTCTGATCTTCACCATGTAATTAAGGCAAATAATGATCTTTCTCCCAAGCAGCATAAATACTTTTTGTACCAGCTTCTTAGTGGCCTAAAATATATACATGCAGCAAATGTCCTTCATCGAGATTTGAAGCCGAAAAACATACTTGCTAATGCTGACTGCAAATTGAAGATATGTGATTTTGGACTTGCTCGTGTATCTTTTAGTGATGCGCCATCTACTATTTTCTGGACAGATTATGTTGCAACTCGTTGGTATCGTGCTCCCGAACTCTGTGGATCATTTTTCTCGAAATATACCCCTGCTATAGATATATGGAGTATCGGATGTATATTTGCAGAAATTCTTACGGGAAAACCCTTGTTTCCTGGAAAAAATGTGGTGCACCAATTAGATCTAATTACCGATCTGTTTGGCACTCCTGAAGCTGAGGCCATAGCGAAGATTCGGAATGAGAAGGCAAGGAGGTATCTAGGAAACATGCGTAAAAAACCACCAGTTCCATTCTCACGAAAGTTTCCCAATGTCGACCCATCGGCACTTCGTTTACTGGAACGTCTTCTGGCATTTGATCCCAAATGCCGTCCAACAGCTGCAGAGGCACTTTCTGATCCTTACTTCAATGGTATTGCGAAAACGGAACTTGAACCTTCTATTCAACCAATTTCAAAAATAGAGTTCGAGTTTGAGAGGAGGAGATTATCAAAAGATGATATTAGAGAGTTAATTTATGCAGAGATTTTAGAGTATCATCCCCAAATGCGTGAGGAGTGTCTACACCCTGAAGATCAAACTACCTTTTTGTATCCAAGTGGCGTTGATCGATTTAGGCTTCAGTTTGCGCATCTGGAAGAGCACCATGTTAATGGTGAAAGAAGACTTCCACTTCAAAGGCAGAACATTTCTTTACCTCGCGAGCGGGTTAGTCCAACTGAGAACAACAACGATGCACATGACATTGATTTTCAAAGGGGGGAAGACAAGAGTGCTCATCTCTTCAAAAGTGCTAGCATTAGTGCATCGAGGTGTGTTGGGGTCTTACCGAAGGAAAAGTCTGAGGCGGAAGAAACGAGTTCTGAAGTGAAAAATGAAGGAGTGGATGGGCCGTCTCAAAAGATTGCAGTCCTTCAGACTTAA 1641 41.62 MLEFSGGELNQNRGRRPLVLYGERNSCGRCCLWFYCRISIGLIHIEIELTLIDAIMDRFNKLLIVLQDDKQSDFFTEYGEASRYQIQEVVGKGSYGVVGSAIDSQTGERVAIKKINDVFEHVSDAIRILREIKLLRMLHHPNIVEIKHIMLPPSQREFKDIYLVFELMKSDLHHVIKANNDLSPKQHKYFLYQLLSGLKYIHAANVLHRDLKPKNILANADCKLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEILTGKPLFPGKNVVHQLDLITDLFGTPEAEAIAKIRNEKARRYLGNMRKKPPVPFSRKFPNVDPSALRLLERLLAFDPKCRPTAAEALSDPYFNGIAKTELEPSIQPISKIEFEFERRRLSKDDIRELIYAEILEYHPQMREECLHPEDQTTFLYPSGVDRFRLQFAHLEEHHVNGERRLPLQRQNISLPRERVSPTENNNDAHDIDFQRGEDKSAHLFKSASISASRCVGVLPKEKSEAEETSSEVKNEGVDGPSQKIAVLQT 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 812233 816354 - Cp4.1LG20g01560.1 Cpe20g00144 486773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00144 546 ProSiteProfiles Protein kinase domain profile. 84 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00144 546 Gene3D Transferase(Phosphotransferase) domain 1 170 398 - -
Cpe20g00144 546 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
Cpe20g00144 546 Pfam Protein kinase domain 84 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00144 546 MobiDBLite consensus disorder prediction 516 530 - -
Cpe20g00144 546 CDD STKc_TDY_MAPK 83 420 - -
Cpe20g00144 546 Gene3D Phosphorylase Kinase; domain 1 100 421 - -
Cpe20g00144 546 MobiDBLite consensus disorder prediction 516 546 - -
Cpe20g00144 546 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 53 490 - -
Cpe20g00144 546 SMART serkin_6 84 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00144 546 MobiDBLite consensus disorder prediction 465 487 - -
Cpe20g00144 546 SUPERFAMILY Protein kinase-like (PK-like) 80 380 IPR011009 -
Cpe20g00144 546 ProSitePatterns MAP kinase signature. 119 222 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe20g00144 546 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 53 490 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g01119 Cpe20g00144 CCT
Cpe09g01119 Cpe20g00144 ECH
Cpe04g01376 Cpe20g00144 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00144 Cpe-Chr20:812233 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe04g01090 Cpe-Chr4:9489949 Cpe20g00144 Cpe-Chr20:812233 1.36E-07 transposed
Cpe18g00681 Cpe-Chr18:6822933 Cpe20g00144 Cpe-Chr20:812233 0 wgd
Cpe20g00144 Cpe-Chr20:812233 Cpe04g01376 Cpe-Chr4:11169248 0 wgd
Cpe20g00144 Cpe-Chr20:812233 Cpe09g01119 Cpe-Chr9:9629950 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63067 PF00069 Pkinase 5.20E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00144 - - bhj:120082540 866.685