Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe20g00145 | ATGAAGAACCTCCTCAAGAAGTTCCACATCATGTCCAGTGGTCAGTCAGACGACGCATCCGAAGGGTCTACTTCATCGAGGGGCAGTAAATTAATTGAGGCTTCATCGTCTGATAAGCTGCTATCTCGCTCCCGGCCGACCCATTTTAGCTCTGAGCATAAACCCTTATCGGGGTTATCCGGTTGGCTGAACTCTGTTACAAATAGGCGTAGCCCCAGCCCTCCATCATCTTCGAATCCCACTGCAGGGGAGATAATGGAGCCATCGGATTCAGTATCTAGCAGAGATGCTGCATTGGATACATCTAGGCATGATTCAGGGTCGAGTAACTCGAGGGATCCTGATATAGAGGAAGAGTATCAGATACAGCTTGCTTTGGAAATGAGTGCTAGAGAGGATCCTGAGGCGGCTCAGATTGAGGCTGTGAAGCAGATCAGTTTGGGGTCATGTGATCCTGATAACACTCCAGCTGAAGTTATTGCCTTCAGATATTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTTTATGACCTATATGGCGTCTTCACCGAGTCCACCTCAGAGAAAATGCCTTCCTTAGTTGATTTGCAAGGAGCACCAATGTCTGGCAGTGTCACTTGGGAAGCAGTTCTGATCAACAAAGCTGCTGATGCTAACTTATTGAAACTTGAACAGACAGCATTGGAGATGGCCATCAAGATGGGGTCAGAATCTCCAATTTCTGTAAATAGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCAGATCATATGGGGGGACCAGTGGGGGATCCTGAAAAGATGTTGATAAAATGGAGAAATCTTAGTTACAGCTTGAAAGCAACCCTTGGCAGTATGGTTTTGCCTCTTGGCTCCCTTACTGTAGGGTTGGCCCGTCATCGTGCATTGTTATTCAAGCTTTTGGCAGATGGCGTGGGCATTCCTTGTCGGTTGGTAAAAGGACCACAGTACACGGGTTCTGATGATGTGGCAATGAACTTCGTAAAGATTGATGATGGAAGGGAGTACATTGTCGATTTAATGGCAGATCCTGGTGCACTTATTCCAGCTGATGTTGCTGGATCGCATGTAGAGTATGATGGATCCCCTTTTTCAGCCAGTCCACTTTCTAGAGATGTTGATTCCTCTCAGGCAGCATCTTCAAGCAGTGGGGTTGGCAGTTCATTAGAGGAAAATCCATATTTTGGGATATCGGATAGGAAACCAAAGTCCGGGACTCTCAGTGCCACAAAGGAATATGATCCTCCCAATGTCAACAAGGGGCCGTCACGTGATTTTGCTAGCAAACCAAATTATCCTGGCATGCACATTCGATCACCTTCATGGACCGAGGGTGTTAGCTCACCTGCCGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCACGGTTGGCTCAGAAGCTTCATGATGTGTTGCTTGAAAGTGGTGTAGTTGCTCCCCCTAACTTGTTTACCGAGGCATACCCCGACCAAATAGATGTTATCGTTGAGTCTAAGTCACCAACGGAAGACAAGGATCAAAGTAGGAAGGTGCCTGGTCTCTGTGAAAGTGTAGATAAGAAAGATCCTCGAAACGAAAGCACAAAATCCGATATTACCCTTGATGATGTTGCAGAATGTGAAATCCCATGGGAAGAAATTTCCTTGGGCGAGCGTATTGGACTTGGATCATATGGGGAGGTCTACCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGATTTCTAGACCAGGATATTTCTGGCGAAACTCTTGAAGAATTCAAAAGTGAGGTTCGAATTATGAAAAGGCTTCGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTGACTCGTGCTCCCCATCTTTCAATTGTTACCGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTGCTTCACCGTCCCAACAATCAATTAGACGAACGAAAGCGAATGAGGATGGCCCTTGATGCAGCTCGGGGAATGAATTATTTGCACAATTGCACGCCTGTCGTTGTACACCGTGATTTGAAGTCCCCAAATCTACTTGTCGATAAAAATTGGGTCGTTAAGGTGTGTGATTTTGGTTTATCAAAAATGAAGCATAGCACATTTCTTTCTTCAAGGTCAACAGCGGGAACCGCTGAGTGGATGGCTCCAGAAGTGCTGAGAAATGAACCTTCAGATGAAAAGTGCGATGTCTATAGTTACGGAGTCATACTTTGGGAGCTGTCTACGATGCAACAACCGTGGGGAGGAATGAACCCAATGCAAGTTGTTGGCGCCGTTGGCTTTCAGCATCGCCGTCTTGACATCCCAGACAATATGGATCCTGCCATCGCCGACATTATTAGGAAATGCTGGCAAACAGATCCAAGGTTAAGACCTTCATTTGCGGAGATTATGGCTGCGTTAAAGCCGCTGCAGAAGCCAATGTCGAGTTCTCAAGTGCCGAGACCAAGTGGTCGTGATAAGGCTCGATTGTTGCAAGTTGCGGAAGACCCGTCAGGCTAG | 2559 | 46.27 | MKNLLKKFHIMSSGQSDDASEGSTSSRGSKLIEASSSDKLLSRSRPTHFSSEHKPLSGLSGWLNSVTNRRSPSPPSSSNPTAGEIMEPSDSVSSRDAALDTSRHDSGSSNSRDPDIEEEYQIQLALEMSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFTESTSEKMPSLVDLQGAPMSGSVTWEAVLINKAADANLLKLEQTALEMAIKMGSESPISVNSYLVRKLAVLVSDHMGGPVGDPEKMLIKWRNLSYSLKATLGSMVLPLGSLTVGLARHRALLFKLLADGVGIPCRLVKGPQYTGSDDVAMNFVKIDDGREYIVDLMADPGALIPADVAGSHVEYDGSPFSASPLSRDVDSSQAASSSSGVGSSLEENPYFGISDRKPKSGTLSATKEYDPPNVNKGPSRDFASKPNYPGMHIRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKSPTEDKDQSRKVPGLCESVDKKDPRNESTKSDITLDDVAECEIPWEEISLGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGETLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPHLSIVTEFLPRGSLYRLLHRPNNQLDERKRMRMALDAARGMNYLHNCTPVVVHRDLKSPNLLVDKNWVVKVCDFGLSKMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAIADIIRKCWQTDPRLRPSFAEIMAALKPLQKPMSSSQVPRPSGRDKARLLQVAEDPSG | 852 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 821271 | 831537 | + | Cp4.1LG20g01420.1 | Cpe20g00145 | 486774 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe20g00145 | 852 | Gene3D | Transferase(Phosphotransferase) domain 1 | 647 | 832 | - | - | |
Cpe20g00145 | 852 | Pfam | Protein tyrosine and serine/threonine kinase | 569 | 820 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe20g00145 | 852 | ProSiteProfiles | Protein kinase domain profile. | 568 | 824 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe20g00145 | 852 | MobiDBLite | consensus disorder prediction | 9 | 44 | - | - | |
Cpe20g00145 | 852 | CDD | STKc_MAP3K-like | 574 | 820 | - | - | |
Cpe20g00145 | 852 | MobiDBLite | consensus disorder prediction | 51 | 88 | - | - | |
Cpe20g00145 | 852 | ProSitePatterns | Protein kinases ATP-binding region signature. | 574 | 595 | IPR017441 | GO:0005524 | |
Cpe20g00145 | 852 | MobiDBLite | consensus disorder prediction | 97 | 116 | - | - | |
Cpe20g00145 | 852 | MobiDBLite | consensus disorder prediction | 824 | 852 | - | - | |
Cpe20g00145 | 852 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 157 | 360 | - | - | |
Cpe20g00145 | 852 | PANTHER | MAP KINASE KINASE KINASE-LIKE PROTEIN | 1 | 515 | - | - | |
Cpe20g00145 | 852 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 687 | 699 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe20g00145 | 852 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 515 | - | - | |
Cpe20g00145 | 852 | MobiDBLite | consensus disorder prediction | 1 | 116 | - | - | |
Cpe20g00145 | 852 | MobiDBLite | consensus disorder prediction | 520 | 552 | - | - | |
Cpe20g00145 | 852 | SMART | serkin_6 | 568 | 823 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe20g00145 | 852 | Gene3D | Phosphorylase Kinase; domain 1 | 561 | 645 | - | - | |
Cpe20g00145 | 852 | MobiDBLite | consensus disorder prediction | 378 | 456 | - | - | |
Cpe20g00145 | 852 | MobiDBLite | consensus disorder prediction | 380 | 401 | - | - | |
Cpe20g00145 | 852 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 545 | 850 | - | - | |
Cpe20g00145 | 852 | PANTHER | MAP KINASE KINASE KINASE-LIKE PROTEIN | 545 | 850 | - | - | |
Cpe20g00145 | 852 | SUPERFAMILY | Protein kinase-like (PK-like) | 550 | 819 | IPR011009 | - | |
Cpe20g00145 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 728 | 738 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe20g00145 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 681 | 699 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe20g00145 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 747 | 769 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe20g00145 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 642 | 655 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe20g00145 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 791 | 813 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00257 | Cpe-Chr2:1330695 | Cpe20g00145 | Cpe-Chr20:821271 | 1.82E-82 | dispersed | |
Cpe06g00238 | Cpe-Chr6:1261090 | Cpe20g00145 | Cpe-Chr20:821271 | 4.34E-72 | dispersed | |
Cpe08g01046 | Cpe-Chr8:7996171 | Cpe20g00145 | Cpe-Chr20:821271 | 7.47E-39 | dispersed | |
Cpe10g00265 | Cpe-Chr10:1584095 | Cpe20g00145 | Cpe-Chr20:821271 | 7.21E-39 | dispersed | |
Cpe12g00324 | Cpe-Chr12:2140956 | Cpe20g00145 | Cpe-Chr20:821271 | 5.06E-77 | dispersed | |
Cpe18g00079 | Cpe-Chr18:2046181 | Cpe20g00145 | Cpe-Chr20:821271 | 1.81E-60 | dispersed | |
Cpe18g00543 | Cpe-Chr18:6006405 | Cpe20g00145 | Cpe-Chr20:821271 | 7.86E-49 | dispersed | |
Cpe20g00145 | Cpe-Chr20:821271 | Cpe06g00457 | Cpe-Chr6:2662617 | 1.84E-148 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63068 | PF07714 | PK_Tyr_Ser-Thr | 9.70E-68 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe20g00145 | - | - | lsv:111885432 | 1008.05 |