Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00165 ATGGCTCTGGTTCGTGATCGCCGCCAGTTGAACCTCCGCCTCCCCGACCTCTCCGACTGCCGTCCCCGCTTCCCTCTCCCTCTCCCTCCATCCTCCGCTGCTGCTCCCGCCGCTACAGCCGCCGCCGCCGCTCCCGCTGCCTCCGACCTCGAAAAGCTTCAAGTCCTCGGCCATGGCAACGGCGGCACCGTCTACAAAGTCCGCCACAAGCGTACCTCCGCAACCTACGCTCTCAAGGTTGTCCACGGTGACTGCGATCCAACCGTTCGTCGCCAGGTTTTCAGAGAGATGGAGATTCTCCGCCGTACTGACTCTCCTTACGTCGTTCAGTGCCATGGAATCTTCGAGAAGCCGTCTGGAGACGTTACGATTTTGATGGAGTATATGGATCTAGGATCGCTTGATTCGCTCTTGAAGAAGAACTCGACGTTGTCAGAAGCGACGCTCGCTCACGTCGCGCGTCAGGTTCTTAACGGACTTCACTATCTTCACTCTCACAAAATCATTCATCGCGATATTAAGCCGTCGAATCTGTTGGTGAATAAGAATATGGAGGTTAAGATTGCCGATTTTGGAGTTAGTAAGATCATGTGCCGGACTTTGGATGCTTGCAATTCCTACGTCGGAACCTGCGCTTATATGAGTCCGGAGCGGTTCGATCCGGACACTTACGGCGGAAATTACAACGGTTACGCCGGCGACATATGGAGTTTGGGGCTTACTCTTCTGGAGCTCTATTTAGGTCATTTTCCTTTCCTACCGCCTGGTCAGAGACCAGATTGGGCGACTCTGATGTGTGCGATTTGCTTCGGCGAGCCGCCGACGCTGCCGGAGGATGCGTCGGAGGACTTTCGGAGCTTCGTCGAGTGTTGCTTGCAGAAGGAATCGAGCAAGAGGTGGACGGTGGCGCAGTTATTGACACATCCGTTTGTGTGCAAGGAATCGAGATCTGATCGGTGA 960 54.9 MALVRDRRQLNLRLPDLSDCRPRFPLPLPPSSAAAPAATAAAAAPAASDLEKLQVLGHGNGGTVYKVRHKRTSATYALKVVHGDCDPTVRRQVFREMEILRRTDSPYVVQCHGIFEKPSGDVTILMEYMDLGSLDSLLKKNSTLSEATLAHVARQVLNGLHYLHSHKIIHRDIKPSNLLVNKNMEVKIADFGVSKIMCRTLDACNSYVGTCAYMSPERFDPDTYGGNYNGYAGDIWSLGLTLLELYLGHFPFLPPGQRPDWATLMCAICFGEPPTLPEDASEDFRSFVECCLQKESSKRWTVAQLLTHPFVCKESRSDR 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 929013 929972 - Cp4.1LG20g01640.1 Cpe20g00165 486794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00165 319 ProSiteProfiles Protein kinase domain profile. 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00165 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Cpe20g00165 319 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Cpe20g00165 319 SMART serkin_6 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00165 319 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 5 316 - -
Cpe20g00165 319 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 5 316 - -
Cpe20g00165 319 Pfam Protein kinase domain 51 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00165 319 SUPERFAMILY Protein kinase-like (PK-like) 48 313 IPR011009 -
Cpe20g00165 319 Gene3D Phosphorylase Kinase; domain 1 33 130 - -
Cpe20g00165 319 Gene3D Transferase(Phosphotransferase) domain 1 132 319 - -
Cpe20g00165 319 CDD PKc_MAPKK_plant_like 49 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01751 Cpe-Chr2:14284672 Cpe20g00165 Cpe-Chr20:929013 4.47E-96 dispersed
Cpe03g01040 Cpe-Chr3:8476797 Cpe20g00165 Cpe-Chr20:929013 3.62E-81 dispersed
Cpe18g00340 Cpe-Chr18:4849508 Cpe20g00165 Cpe-Chr20:929013 2.37E-68 dispersed
Cpe20g00165 Cpe-Chr20:929013 Cpe09g01104 Cpe-Chr9:9526182 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63070 PF00069 Pkinase 2.60E-65 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00165 K20604 - csv:101203133 570.852