Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00206 ATGGGGGAGAAGCCGGAAGTGTTGGAGGCTGTGTTGAAGGAAGCTGTGGATTTGGAAAATATACCCATTGATGAGGTTTTTGAGAACCTGAGATGTAGCAAAGAGGGTCTTACCAGTGAGGCTGCTGAGGAAAGGCTGAAGATTTTTGGCCACAACAAGCTCGAGGAAAAGAAGGAAAGCAAAGTTTTGAAGTTTTTGGGGTTTATGTGGAATCCTCTATCATGGGTTATGGAAGCTGCTGCAATTATGGCTATTGCACTTGCAAATGGAGGAGGAAAGCCCCCTGACTGGCAAGATTTTGTGGGTATCATTATTTTGCTTATCATCAACTCCACAATCAGTTTTATTGAGGAAAACAATGCAGGAAACGCTGCTGCTGCTCTCATGGCTCGTCTTGCTCCCAAAGGCAAGGTTCTTCGAGATGGAAGATGGAGCGAGCAAGATGCTTCTATTTTAGTTCCTGGTGACATAATCAGTGTTAAACTTGGGGACATTATTCCAGCTGATGCTCGTCTTCTGGATGGGGATCCATTAAAAATTGACCAGTCTGCACTTACAGGTGAATCTCTTCCTGTAACGAAAGGTCCCGGTGACGGCGTGTACTCGGGTTCTACTTGCAAGCAAGGAGAGATTGAAGCTGTGGTCATTGCTACTGGTGTCCATACCTTTTTTGGTAAAGCTGCTCATCTTGTTGACACCACCAACCAAGTCTTGACAGCCATAGGGAATTTCTGCATATGTTCCATTGCTTTGGGAATGGTAATAGAGATCATTGTGATGTACCCAATTCAGGACCGTGAGTATCGTCCTGGAATCGATAATCTCCTTGTGCTACTGATTGGAGGAATTCCCATAGCCATGCCTACTGTTCTATCTGTGACAATGGCTATTGGTTCTCATAGGTTATCCCAACAGGGTGCCATCACGAAAAGGATGACGGCTATCGAAGAAATGGCTGGCATGGATGTGCTTTGCAGTGACAAGACAGGAACCCTGACTTTGAACAAGTTAACTGTCGACAAAAATCTCGTTGAGGTTGGCTGA 1044 45.21 MGEKPEVLEAVLKEAVDLENIPIDEVFENLRCSKEGLTSEAAEERLKIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIILLIINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWSEQDASILVPGDIISVKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVLTAIGNFCICSIALGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVG 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1186069 1188024 - Cp4.1LG20g02060.1 Cpe20g00206 486835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00206 347 Pfam E1-E2 ATPase 132 304 - -
Cpe20g00206 347 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Cpe20g00206 347 Gene3D - 67 321 - -
Cpe20g00206 347 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Cpe20g00206 347 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 320 IPR023298 -
Cpe20g00206 347 PANTHER CALCIUM-TRANSPORTING ATPASE 3 346 - -
Cpe20g00206 347 Gene3D - 322 334 IPR023214 -
Cpe20g00206 347 ProSitePatterns E1-E2 ATPases phosphorylation site. 327 333 IPR018303 -
Cpe20g00206 347 PRINTS Sodium/potassium-transporting ATPase signature 73 87 - -
Cpe20g00206 347 PRINTS Sodium/potassium-transporting ATPase signature 318 339 - -
Cpe20g00206 347 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 103 341 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe20g00206 347 PRINTS P-type cation-transporting ATPase superfamily signature 325 339 - -
Cpe20g00206 347 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Cpe20g00206 347 SUPERFAMILY Calcium ATPase, transduction domain A 136 231 IPR008250 -
Cpe20g00206 347 Gene3D - 35 232 - -
Cpe20g00206 347 PANTHER PLASMA MEMBRANE ATPASE 1 3 346 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe18g00807 Cpe20g00206 CCT
Cpe18g00807 Cpe20g00206 ECH
Cpe04g01518 Cpe20g00206 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02378 Cpe-Chr1:19893753 Cpe20g00206 Cpe-Chr20:1186069 1.60E-97 wgd
Cpe18g00807 Cpe-Chr18:7531941 Cpe20g00206 Cpe-Chr20:1186069 0 wgd
Cpe20g00206 Cpe-Chr20:1186069 Cpe04g01518 Cpe-Chr4:11954464 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00206 K01535 - csv:101214920 632.484