Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00236 ATGAGGAATTTGAGCTGGTTCAAGCCAATTTCCATCAATGGGAAGCCTGGGAGGAGGCTTTCCCTTGGAGAGTACGAGCGGGCTGTGTCGTGGTCTAAGTACTTGGTGTCTTCAGGAGCAGAGATAAAGGGAGAGGGAGAAGAGGAATGGAGTGCAGACATGTCTCAGTTGTTCATTGGCTTCAAACTTGCTACTGGAAGACACAGCAGGATTTACAGAGGCGTTTATAAGCAAAGGGATGTTGCAATTAAGCTGATAAGCCAGCCTGAGGAGGATGAACACTTGGCTAACTTTCTTGAAAATCAGTTCATTTCAGAGGTGGCATTGCTATTTCGATTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAACCTCCAGTTTTTTGCATAATCACGGAGTATATGGCGGGGGGCTCGTTAAGAAAGTATCTGCATCAACAGGAGCCACATTCGGTTCCGCTGAACTTGGTTCTGAAACTAGCACTCGAGATCTCGCGCGGGATGCAGTATCTTCATTCTCAGGGAATACTCCACAGAGATCTCAAATCAGAAAACCTTTTACTTGGTGAAGATATGTGCATTAAGGTAGCCGATTTCGGTATCTCATGCTTGGAATCTCAATGCGGAAGCGCAAAGGGATTCACCGGAACATATCGATGGATGGCACCGGAAATGATCAAAGAAAAACACCATACTAAGAAAGTTGATGTTTATAGCTTTGGCATTGTCTTGTGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAGGCAGCATTTGCAGTCTGCCAGAAGAATGCAAGACCACCTCTGCCTTCAGCTTGCCCGGAAGCGTTTCGCCATCTGATCAAGAGATGCTGGTCGAAAAATCCCAACAAGCGACCGCATTTCGACGAGATTGTTTCGATTTTGGAAGCTTATATGGAGTCTTACAATGAAGATCGAGAGTTTTTCTGTCATTACCTCCCTTCATCTAGAAATACTCCATTACAATGCTTACCAAAGTGTATTACAGAACAATTGTGTGCTTCGTGGAAGCCTAGGAATTCATCATCTTGA 1080 44.54 MRNLSWFKPISINGKPGRRLSLGEYERAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKLATGRHSRIYRGVYKQRDVAIKLISQPEEDEHLANFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMAGGSLRKYLHQQEPHSVPLNLVLKLALEISRGMQYLHSQGILHRDLKSENLLLGEDMCIKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKNARPPLPSACPEAFRHLIKRCWSKNPNKRPHFDEIVSILEAYMESYNEDREFFCHYLPSSRNTPLQCLPKCITEQLCASWKPRNSSS 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1347646 1349619 + Cp4.1LG20g02350.1 Cpe20g00236 486865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00236 359 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00236 359 Pfam Protein tyrosine and serine/threonine kinase 61 311 IPR001245 GO:0004672|GO:0006468
Cpe20g00236 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Cpe20g00236 359 CDD STKc_MAP3K-like 63 311 - -
Cpe20g00236 359 Gene3D Transferase(Phosphotransferase) domain 1 140 338 - -
Cpe20g00236 359 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Cpe20g00236 359 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Cpe20g00236 359 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Cpe20g00236 359 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Cpe20g00236 359 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Cpe20g00236 359 PANTHER SERINE-THREONINE PROTEIN KINASE 1 333 - -
Cpe20g00236 359 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00236 359 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Cpe20g00236 359 SUPERFAMILY Protein kinase-like (PK-like) 46 311 IPR011009 -
Cpe20g00236 359 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 333 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g01031 Cpe20g00236 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00762 Cpe-Chr10:4328877 Cpe20g00236 Cpe-Chr20:1347646 5.54E-140 dispersed
Cpe13g00120 Cpe-Chr13:849209 Cpe20g00236 Cpe-Chr20:1347646 6.82E-25 dispersed
Cpe19g00939 Cpe-Chr19:6724858 Cpe20g00236 Cpe-Chr20:1347646 1.46E-139 dispersed
Cpe19g01019 Cpe-Chr19:7105612 Cpe20g00236 Cpe-Chr20:1347646 1.77E-113 dispersed
Cpe20g00236 Cpe-Chr20:1347646 Cpe20g00437 Cpe-Chr20:2510681 5.86E-101 dispersed
Cpe20g00236 Cpe-Chr20:1347646 Cpe04g01549 Cpe-Chr4:12135714 2.86E-64 wgd
Cpe20g00236 Cpe-Chr20:1347646 Cpe09g01031 Cpe-Chr9:9064342 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63073 PF07714 PK_Tyr_Ser-Thr 1.40E-66 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00236 - - csv:101222762 691.034