Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00245 ATGGAAGAAACATTTTTTCCATTTCGTGGGATTAAGAATGATATAAGAGGAAGACTTCTGTGCTATAGACAGGATTGGACTGGCGGGTTTCGCACCGGTATCAGGATCTTGGCCCCAACGACGTACATATTCTTCGCTTCAGCAATTCCGGTTATATCGTTCGGGGAGCAGCTAGAAAGGAATACATATGGGACTCTAACTGCGGTACAAACTCTAGCATCAACAGCACTTTGTGGCATTATCCACTCCGTGTTCGGGGGACAGCCTCTGCTCATCCTTGGCGTTGCTGAACCAACTGTTTTGATGTATACGTTCATGTTCGACTTTGCAAAGGACCGAAAGGAACTGGGGCAGGAACTATTCTTAGCCTGGACAGGATGGGTATGTGTGTGGACAGCCATTTTGCTTTTCTTGCTTGCTGTGTTGGGTGCATGCTCCTTGATCAATAGGTTCACACGTCTTGCTGGAGAATTGTTCGGTCTGCTAATTGCTATGCTCTTTATGCAGCAGGCGATACGTGGTGTTGTGGAGGAATTCAGCATACCCCAAAGGGAAAATCCGAATCGTGTGGCACTCCAACCTCCCTGGCTCTTTGGCAATGGAATGTTTGCATTAGTGCTATCGTTCGGGCTTCTACTAACCGCCCTTAAAAGCCGCAAGGCTAGATCATGGCGCTATGGGACTGGTTGTTTACGAGGCTTTATCGCCGATTATGGAGTTCCACTTATGGTGCTCGTATGGACAGCGTTATCTTACATTCCAGTCAATAACGTCCCACATGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGAGCCTACTCAAACTGGACAGTCATAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAACTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCATATCATTATGATCTTCTTCTCCTAGGCTTCCTTGTTATCCTCTGTGGACTTATAGGCATACCACCTTCTAATGGTGTAATTCCTCAGTCTCCTATGCACACTAAAAGCTTAGCTACCCTTAAACATCAGTTCTACCAGAACATGCAAGAGGCATATAATGAGATGCAGACTCCTTTAATTTATCAAAATCCACCAGCTGTGGGGCTGAAGGAGTTGAAAGATTCCACCATCCAACTAGCTTCAAGAACTGGATACATTGATGCACCTGTGGATGAAACTGTTTTCGATGTGGACAAAGATGTCGACGATCTTCTTCCTGTAGAAGTTAAAGAACAACGTCTCAGCAATTTGCTTCAGGCAGTAATGGTTGGTGGTTGTGTTGCTGCCATGCCTCTTTTGAAGAAGATCCCGACTTCGGTTCTTTGGGGCTACTTCGCTTTCATGGCAATCGAGAGCTTGCCCGGAAATCAATTCTGGGAAAGGATTTTACTGCTTTTCACTGCTCCGAATCGTAGATACAAGGTGTTGGAGGAATATCATGCGACCTTTCTAGAAACTGTCCCCTTCAAAACAATTGCTACTTTCACCCTGTTTCAGACAGTGTATCTGCTGATGTGTTTTGGTTTAACATGGATACCAATTGCTGGTGTTCTTTTTCCGCTGCTGATCATGCTGCTTGTACCTGTGCGCCAGTATTTGCTCCCCAGGTTCTTCAAAGGTGCTCATCTTCAGGACTTGGATGCTGCTGAATACGAGGAAGCCCCTGCAATCGCGTTTAATCCATCCTTCGAAGATCGAATGGGAAGAACTTCCAACATTGACGACGGTGAAATACTCGACGAGATGATCACGAGAAGCCGTGGCGAGATTCGGCGTACACAGAGTTCGAAAATGACGAGCTCATCCCCAAATACAGTAGAGGGCATCAAACCTACGTACAGCCCACAGATATCATCACAGAAACTGTACAGTCCACGGATCAATGAACTGAGAAGGGAGAGGAGTTCTCTATCTCCTGGAAAAGGACCTGGCTTTAAGCTGAATTCTAGTCCTAGTCCTAGTCCTAGTCCCAGTCCGAGTGCAGAGCCAGGGCCAGGACCATCCTTTAGAAATTAG 2109 45.85 MEETFFPFRGIKNDIRGRLLCYRQDWTGGFRTGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTALCGIIHSVFGGQPLLILGVAEPTVLMYTFMFDFAKDRKELGQELFLAWTGWVCVWTAILLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFSIPQRENPNRVALQPPWLFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGFIADYGVPLMVLVWTALSYIPVNNVPHGIPRRLFSPNPWSQGAYSNWTVIKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQFYQNMQEAYNEMQTPLIYQNPPAVGLKELKDSTIQLASRTGYIDAPVDETVFDVDKDVDDLLPVEVKEQRLSNLLQAVMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPRFFKGAHLQDLDAAEYEEAPAIAFNPSFEDRMGRTSNIDDGEILDEMITRSRGEIRRTQSSKMTSSSPNTVEGIKPTYSPQISSQKLYSPRINELRRERSSLSPGKGPGFKLNSSPSPSPSPSPSAEPGPGPSFRN 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1386587 1392312 + Cp4.1LG20g02500.1 Cpe20g00245 486874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00245 702 PANTHER ANION EXCHANGE PROTEIN 1 671 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cpe20g00245 702 PANTHER BORON TRANSPORTER 2-RELATED 1 671 - -
Cpe20g00245 702 MobiDBLite consensus disorder prediction 681 702 - -
Cpe20g00245 702 MobiDBLite consensus disorder prediction 624 656 - -
Cpe20g00245 702 MobiDBLite consensus disorder prediction 599 623 - -
Cpe20g00245 702 Pfam HCO3- transporter family 202 377 IPR011531 GO:0006820|GO:0016021
Cpe20g00245 702 Pfam HCO3- transporter family 438 528 IPR011531 GO:0006820|GO:0016021
Cpe20g00245 702 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Cpe20g00245 702 MobiDBLite consensus disorder prediction 599 702 - -
Cpe20g00245 702 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00817 Cpe-Chr3:5092684 Cpe20g00245 Cpe-Chr20:1386587 0 dispersed
Cpe07g00280 Cpe-Chr7:1844904 Cpe20g00245 Cpe-Chr20:1386587 0 dispersed
Cpe11g00345 Cpe-Chr11:1871037 Cpe20g00245 Cpe-Chr20:1386587 0 dispersed
Cpe20g00245 Cpe-Chr20:1386587 Cpe02g01540 Cpe-Chr2:13082660 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00245 K24194 - csv:101203606 1285.4