Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe20g00246 | ATGCAGAGCTCTTCGGTCACCTTTTCGCCTTCTCTTCCTCTTCTCAAGCCTCGGAGGCCTCATACTTCGTTCTTCAGCTCTGGATGTAACTCAATTCGATCATCTTCTTCGTCTTCTTCAAATTCCAGAGATCTCAGTGACCTGAACAATGTCAGTCTTCCTTCCTCTTGGCCCCGGCGATCTTGGACTTTGTCGACTTCTCCTTTTTCGTCCTCGAAACTCCGCCCATGGACCGGTGTACCTTCTTTTGCTTCGGATTTTGATGCGAATCATTTCAAGGTTCAGGCCGCTGCGGTTCCGGAAAGCTCAGAGGAGGCCGCCAGTGCTGGCGGTAACCTAATGAAAACGTTGGAGCTCGGATTGTTGTTTGGCCTCTGGTACCTTTTCAACATCTACTTTAACATCTACAACAAGCAGGTCCTCAAGGTGTTTCCGTTCCCTGTAACTGTCACTGCTGTTCAATTTGCTGTAGGCACTGTACTTGTTCTTCTTATGTGGGGACTTAATCTCTACAAAAGGCCTAAGATTAGTGGCGCTCAGCTTGCTGCTGTTCTGCCGCTCGCGTTAGTTCACACATTGGGAAATCTTTTTACGAACATGAGTCTTGGTAAAGTGGCCGTATCGTTCACCCACACAATTAAAGCTATGGAGCCTTTTTTTTCAGTTATCCTGTCAGCAATGTTTCTTGGAGAGGATTCAATGGACAACATCACCCTCTTTTCAATTATAACAATCATGTCCTTTTTCTTATTGTCCCCTGTTGCTGTCTTCATGGAAGGTGTCAAGGTTACTCCTGCATACTTACAATCAGCTGGATTGAACGTAAACCAAGTCTTCACTAGGTCTCTTCTTGCTGCCCTTTGTTTCCATGCATACCAACAGGTTTCTTACATGATATTGCAAAGAGTATCGCCTGTTACCCACTCAGTAGGCAATTGTGTAAAGCGTGTTGTTGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCTGTTTCTCCAATAAACTCTATTGGCACTGGAATAGCTCTTGCTGGGGTTTTCCTGTATTCAAGGGTTAAGCGCATCAAAGCCAAGCCGAAGACTGCTTAA | 1089 | 45.45 | MQSSSVTFSPSLPLLKPRRPHTSFFSSGCNSIRSSSSSSSNSRDLSDLNNVSLPSSWPRRSWTLSTSPFSSSKLRPWTGVPSFASDFDANHFKVQAAAVPESSEEAASAGGNLMKTLELGLLFGLWYLFNIYFNIYNKQVLKVFPFPVTVTAVQFAVGTVLVLLMWGLNLYKRPKISGAQLAAVLPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEDSMDNITLFSIITIMSFFLLSPVAVFMEGVKVTPAYLQSAGLNVNQVFTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSIGTGIALAGVFLYSRVKRIKAKPKTA | 362 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 1392890 | 1396441 | - | Cp4.1LG20g02590.1 | Cpe20g00246 | 486875 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe20g00246 | 362 | MobiDBLite | consensus disorder prediction | 23 | 46 | - | - | |
| Cpe20g00246 | 362 | PANTHER | TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED | 63 | 231 | - | - | |
| Cpe20g00246 | 362 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Cpe20g00246 | 362 | PANTHER | SOLUTE CARRIER FAMILY 35 | 63 | 231 | - | - | |
| Cpe20g00246 | 362 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 274 | 353 | - | - | |
| Cpe20g00246 | 362 | PANTHER | SOLUTE CARRIER FAMILY 35 | 233 | 337 | - | - | |
| Cpe20g00246 | 362 | Pfam | Triose-phosphate Transporter family | 233 | 350 | IPR004853 | - | |
| Cpe20g00246 | 362 | Pfam | Triose-phosphate Transporter family | 118 | 232 | IPR004853 | - | |
| Cpe20g00246 | 362 | PANTHER | TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED | 233 | 337 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe09g01023 | Cpe20g00246 | CCT | |
| Cpe09g01023 | Cpe20g00246 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe20g00246 | Cpe-Chr20:1392890 | Cpe10g00176 | Cpe-Chr10:1037390 | 1.45E-44 | dispersed | |
| Cpe01g02339 | Cpe-Chr1:19640910 | Cpe20g00246 | Cpe-Chr20:1392890 | 7.43E-86 | wgd | |
| Cpe20g00246 | Cpe-Chr20:1392890 | Cpe09g01023 | Cpe-Chr9:9014219 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe20g00246 | K15283 | - | csv:101203848 | 500.745 |