Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00269 ATGGAAGTTGGGGAAACCCTCTGGTTCATAGTTGTTCATCTGGAATCTGCATCCGTTGAAGTTCTGCTTGGATCGCTCTGTTCATCCAAGCTTATTTCGAAAAACTGGGTTCAATCTGAAACTAAGATGACATCGAGAGTAGAAATTGATGAGGACTCTGAAACGAAGGGAAGTATGTGGGTTCTAGACCAGAAGCTGGATCAGCCTATGGACGAAGAAGCTGGGAGACTTAGTAACATGTACAAAGAGAAGAAATTCTCGGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCTCTATACGTTTTCTACAATACATTTCCTCATGGGATATCTGATCCGGAGGATGTAATTGGAGCACTTTCATTAATTATATACTCTCTTACTCTCATTCCACTCATAAAGTATGTATTTATCGTGTGTAAAGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTTTACTCCTTGTTATGTCGTCATGCAAAAGTAAAAACTATTCCAAACCAACATCGAACTGATGAAGAGCTAACAACGTATAGCCGCTCTAAATTTCATGAGCACTCATTTGCTGCTAAAACTAAAGGATGGCTTGAAAAACGATCATCCAGGAAGAATGCTTTGCTCATTCTTGTTCTTGTTGGCACTTCCATGGTTGTTGGAGATGGAATTCTCACTCCTGCAATATCGGTGGGATTATTCAGCTTGCAACGCTATGGTACTGATAGAGTTGGTTGGCTCTTTGCTCCAGTTGTGCTACTTTGGTTTCTATTAATTGGAGGTATAGGCATGTTCAACATCTGGAAATATGATAAAACGATTCTACGAGCCTTTTCACCTGTGTATATTTTTCACTATTTTAGAAGGCGAGGGATGGATGGTTGGACGTCCCTCGGAGGCGTGTTGCTGAGTATAACAGGCACAGAGGCTTTATTTGCGGATTTGGCTCATTTTCGTGTAGCAGCTATACAGATTGCTTTTACAGTAGTTGTTTTTCCTTGCCTTCTCTTGGCATACTCTGGACAGGCTGCCTACCTTATGAACAATACGGAGCATGTGGCTGATGTCTTCTACCATTCAATACCAGGGACAGCGGTTGTGGTAGTCATGCTTGTGACCACACTGCTCATGATTCTAATCATGATCTTGGTGTGGCGCTGTCATTGGATCATCGCCCTGATATTCACTGGACTCTCGCTTGTTGTGGAATGCGGTTACTTTTCAGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTTCCCTTAGTGATTGCTGCAGCCTTTCTTATCATCATGTACGTGTGGCATTATGGTACTGTTAAACGATACGAATTCGAGCTGCACAGTAAAGTTTCAATGGCATGGGTTCTCGGTCTTGGTCCCAGTCTAGGACTCGTCCGCGTTCCTGGAATTGGGCTTGTCTATACCGAGCTAGCAAGCGGCGTACCTCACATATTTTCCCATTTCATTACTAATCTCCCAGCTATCCATTCTGTCGTTGTGTTTGTCTGTGTGAAATATCTCCCAGTCTACACAGTGCCAGAGGAAGAAAGATTCCTTGTCAAGCGGATAGGAACAAAGGATTTCCACATGTTTCGTTGCGTTGCTAGATATGGTTACAAAGACCTCCACAAAAAAGATGATGATTTTGAGAAAAAGCTTTTTGATAGCATCTTTCTCTTTGTCAGGCTTGAATCCATGATGGAGGGTTGTTCAGACTCTGATGAGTACAGTTTGTATGGGCAGCAAACTGAGCGTTCAAGGGACGGCCTGTTGATTGCCAGCCATGGCAATGCAGCACCAGCTTCATCCAATGTGGGCACTACCCTCTCGTCAGTTGACTCAATCGTGCCGGTTGGATCTAACACAGTAAGATCATGTGAGCAAGCAAGCAGCAACCATACTGATAGCGATGAGATTGAGTTCTTGATTAGGTGTAGAGATGCTGGGGTGGTGCACATTCTGGGAAACACTGTAATTAGAACAAGGGAATCGAAATTCTTCAAGAGGATAGCTGTGGATTACGTATATGCCTTTCTTAGGAAGATTTGCAGGGAGAATAGTGTGATTTTCAATGTTCCTCATGAGAGTTTATTAAACGTTGGCCAAATTTTCTATGTATATCGCAGCGGTTTGGAAATACCGTCGAGTTGTTGTGAAAGACGATATACAGAAATTCCATATTTTCAAAAAATGGCGTCAGGACGCAAGGCTGTTGAGGATACTGACGATAGAGATAGTAGTATCTGGGTTTTGGATCAGCAGTTGGACCAGCCAATGGAGGAGGAGGCTAGGCGGATAAGAAATGCGCATCAGGAAAAGGAACATTCTGTATTTAAAATTCTACAACTTGCATTCCAAAGCCTTGGAATAGTCTACGGAGATTTGGGCACTTCCCCTTTATATGTCTTCTATAACACGTTCCCCGATGGAGTTGAAAATACAGAGGACTTGATAGGAGCTCTTTCATTGATTATATACTCTCTAACTCTCATTCCCCTCATCAAGTACGTGTTTATTGTCTGCAAGGCAAATGACGATGGTCAAGGTGGGACATTTGCTCTATATTCATTACTATGCCGTCATGCTAAAATAGGAACTATCCCTAACCATGACCACAGTGATGAGAAGCTTACAACCTATAGTTGTTCCAAGTACCGTGAACAATCATTTGCTGCAAAAACTAAGAGATGGCTGGAAGGACATCGTGTTAAGAAACACGCAATTCTTGTTCTCGTTCTTGTTGGCTCTTGCATGGTGATTGGGGATGGGATTCTAACACCTGCTATTTCAGTTCTTTCTGCTGTTGGGGGGATCAATGTTGGTCGTACAAAAATAAGCAATGATGTAGCTGTTCTTGTTGCTATTGTCATACTTATTTTCTTGTTTACCATGCAACGTTATGGCACAGATAAAGTTGGTTGGCTTTTTGCCCCGGTAGTTTTTCTGTGGTTCATCTTAATAGGAGGCATCGGCATTTATAACATCTGTAAGTATGATAACGGTGTCCTTAGAGCCTTTTCTCCAGTATATATATATCGGTACTTCAAAAGGGGAGGGAAAGTTGGATGGATATCCCTTGGAGGGATCATGCTTAGTATTACAGGAACTGAAGCACTTTTTGCAGACCTATCCCATTTTCCAGTTTCCTCCATACAAATTGCTTTTACAGTTGTTGTATTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCCTATCTCATGAAAAACCCAAATTATGTTGCCGGTGCCTTCTACCATTCAATTCCAGGGACAGCAGTGATCATAGTGATGTTGGTAACCACATGCCTCATGACTTTAATAATGATACTAGTGTGGCACTCCCACTGGGCTCTAGTCCTGCTCTTCACTTGGTTATCACTGCTCGTGGAGGGTTTCTACCTCTCCTCAGTTATCCAGAAGGTTTATCAAGGTGGGTGGGTTCCATTGGTTATAGCAACAGCGTTTTTCATCATCATGTACACTTGGCATTATGGTACGGCCAAACGTTATGAGATTGAGATGCACACTAAGGTTTCAATGGCATGGATTCTTAGCCTTGGCCCCAGTTTAGGACTTGTAAGGGTACCTGGGATAGGACTCGTGTACACAGAACTAGCAAGTGGAGTCCCCCACATCTTTTCACACTTCATCACAAACTTACCCGCCATTCATTCTGTTGTGGTTTTTGTCTGTTTGAAGTGTTTGCCTGTCTGCACAATCCCGGAAGAAGAGAGATTTTTGGTAAAACGGATTGGACCTAAGAACTTTCGCATGTTTCGCTGTGTAGCTAGATATGGTTACAAAGACCTCCACAAGAAAGATGATGACTTTGAGAAGAAACTCTTTGATAGCCTCTTCTTATTTGTTCGACTCGAGTCTTTGATGGATGGCGGGTCTTCAGATTCGGACGTGTCGAGCCTACTTGATCCACAAAATGAAACAGTTACAGAGTTCCCATTGAACACCCTTAATTCAACTTGCTCGTCTATGGAATTTACAAACCTTTGTACGGCAGACTCGATTCAGCTTGCCAATTCTCCATTGAATCAGAACCAAATCATGGCACCATCCAATCAAGCAAACCATCAGACTGAAATAGATGAGTTAGAGTTCTTGGTTAGCTGTAAAAATGTCGGCGTTGTACACATTCTTGGAAATACAGTAATGACAGCTAGGAGGGACTCCAGCCTCTTCAAAAAGATCGCCATTGATTATGTATATGCATTTCTTAGGAAGATCTGCAGAGATAACAGCGCGATGTTCAATATTCCGCATGAGAGTTTGCTTAATGTTGGCCAAACATTCTATAATAACTTTCACGAGCCTTAA 4368 42.54 MEVGETLWFIVVHLESASVEVLLGSLCSSKLISKNWVQSETKMTSRVEIDEDSETKGSMWVLDQKLDQPMDEEAGRLSNMYKEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGISDPEDVIGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHAKVKTIPNQHRTDEELTTYSRSKFHEHSFAAKTKGWLEKRSSRKNALLILVLVGTSMVVGDGILTPAISVGLFSLQRYGTDRVGWLFAPVVLLWFLLIGGIGMFNIWKYDKTILRAFSPVYIFHYFRRRGMDGWTSLGGVLLSITGTEALFADLAHFRVAAIQIAFTVVVFPCLLLAYSGQAAYLMNNTEHVADVFYHSIPGTAVVVVMLVTTLLMILIMILVWRCHWIIALIFTGLSLVVECGYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGTKDFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTERSRDGLLIASHGNAAPASSNVGTTLSSVDSIVPVGSNTVRSCEQASSNHTDSDEIEFLIRCRDAGVVHILGNTVIRTRESKFFKRIAVDYVYAFLRKICRENSVIFNVPHESLLNVGQIFYVYRSGLEIPSSCCERRYTEIPYFQKMASGRKAVEDTDDRDSSIWVLDQQLDQPMEEEARRIRNAHQEKEHSVFKILQLAFQSLGIVYGDLGTSPLYVFYNTFPDGVENTEDLIGALSLIIYSLTLIPLIKYVFIVCKANDDGQGGTFALYSLLCRHAKIGTIPNHDHSDEKLTTYSCSKYREQSFAAKTKRWLEGHRVKKHAILVLVLVGSCMVIGDGILTPAISVLSAVGGINVGRTKISNDVAVLVAIVILIFLFTMQRYGTDKVGWLFAPVVFLWFILIGGIGIYNICKYDNGVLRAFSPVYIYRYFKRGGKVGWISLGGIMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYSGQAAYLMKNPNYVAGAFYHSIPGTAVIIVMLVTTCLMTLIMILVWHSHWALVLLFTWLSLLVEGFYLSSVIQKVYQGGWVPLVIATAFFIIMYTWHYGTAKRYEIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCLKCLPVCTIPEEERFLVKRIGPKNFRMFRCVARYGYKDLHKKDDDFEKKLFDSLFLFVRLESLMDGGSSDSDVSSLLDPQNETVTEFPLNTLNSTCSSMEFTNLCTADSIQLANSPLNQNQIMAPSNQANHQTEIDELEFLVSCKNVGVVHILGNTVMTARRDSSLFKKIAIDYVYAFLRKICRDNSAMFNIPHESLLNVGQTFYNNFHEP 1455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1502460 1515657 + Cp4.1LG20g02740.1 Cpe20g00269 486898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00269 1455 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 749 1102 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe20g00269 1455 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 240 374 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe20g00269 1455 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1103 1449 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe20g00269 1455 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 44 242 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe20g00269 1455 PANTHER POTASSIUM TRANSPORTER 749 1102 - -
Cpe20g00269 1455 PANTHER POTASSIUM TRANSPORTER 240 374 - -
Cpe20g00269 1455 PANTHER POTASSIUM TRANSPORTER 1103 1449 - -
Cpe20g00269 1455 PANTHER POTASSIUM TRANSPORTER 44 242 - -
Cpe20g00269 1455 PANTHER POTASSIUM TRANSPORTER 374 717 - -
Cpe20g00269 1455 Pfam K+ potassium transporter 796 1103 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe20g00269 1455 Pfam K+ potassium transporter 242 374 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe20g00269 1455 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 374 717 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00269 Cpe-Chr20:1502460 Cpe13g00909 Cpe-Chr13:7755145 8.53E-165 dispersed
Cpe20g00269 Cpe-Chr20:1502460 Cpe09g00927 Cpe-Chr9:8337206 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00269 K03549 - han:110908914 837.41