Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00308 ATGGCGACGACGACCACAAGTATTGGCGGCGGTGGTGGTGGTGGTGGGGAGGATAGAGTTATGGCTACCGCTCAGCAGATTGTTAAGAGCCTCAATACACCTAAGGAGGTTCAAGAAGACATGCTTTTGATCTTCTCTAGTTTTGACAATCGTCTTTCTAATATCTCCAGTTTGGTCAACAGTGGAGATTCGAAGAGGGAAGGGGATCGGTATGAAGCTGCTGAGAAGCTGATTCTTCGTTGGGATTCTGGTCCTGGAGCTTCTCGGAACTCTCTTAATTGGGAGGATTCGCCGGAGGAGGCGGCTGAGTATTTATCGGCGGTGGATGATATCATTCAGTGGATCGATGAGTTGTCAATTCGTTCGGATTCTGCTGAGATCGTCGAGCGTGCTGAGAACGCGATCCAGATCGCTATGTCGAGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAACACTGTCCCTCTCGATGCTGAGCATCTCTACGGTTCAATTCGGAAGGTTTCGCTCTCTTTTGCTTCACACGACAGCGAAAATTCCGATGAGTTTGAGTCGTTTGCCGATGTTGACCGTGGTTCTGGAATCTTCCATGAGCGTGGTGTCAGTTTGGGCGATGATTTGCGAGTCGATTTGATCAATCCTGACGCTGTCGTTGATTTGAAAGAGATCGCCGACCGGATGATTCGGTCTGGATACGAAAAAGAGTGTCTCAACGTGTATACTGGTGTCCGACGCGATGCTCTTGATGAATGCTTGGTGGTTCTTGGAGTTGAGAAGCTAAGTATTGAGGATGTCCAGAAAATTGATTGGAAGATCTTGGACGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTCCGAGTCCTTTTGACGGGCGAGAAGCGACTGTGTGACTATATCTTCAGCGGGTCCGATGACTCTGAGGAAGTCTGCTTCAATGAGACTGCTAAGGGGTGCATCAGGCAGTTACTGAATTTTGCAGAGGCCATTGCCATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGAATACGTTTTGCCGGACTTGCAGGCTATGATCACTGATGAATTTGTGATTGAGGAGGCGCAAGGAGTGCTTTCTAGGCTGGGAGAGGCCGCTAAAGGTACATTTGTTGAGTTTGAGAATGCTGTTCGGAACGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGTTATGTCATGAATTACTTAACATTGGTTGTGGTTTATAGCAAGACTCTTGATGCACTTTTAGAAGGCGACGACGAAGATTTGCAGCACCTAGGGGGTGATGGTGCTGAAAATTCGGAGTTGGAAACTATGTCGCCATTGCCTCGTCGGCTGTTTTCATTGTTATCATCACTGGAGACCAATCTAGAGAAAAAATCCAAACTCTATGGCGATGATTCGATTCAATATATATTTCTCATGAACAATATACAATACATTGTGCAGAAAGCAAAAGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGTAAGCGCCGAGGCCAGGTTCGCATATACGCGACGAACTATCTTAGGGCGTCTTGGGGTAAATTATTAACTTTCTTGAAGGAAGAAGGTACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTACTTTGAAGGAAAAGTTCAAAAATTTCAATGCTGGCTTTGAGGAAATCTACAGGATTCAGACAGGTTGGAAGGTTGCCGATGCTCAACTACGAGAGGAGCTCCGAATTTCGGTATCGGCAAAAGCGCTACCTGCATATCGTGCCTTCTTGGGAAGGCATGGAAGTCAGTTAGAGAATACAAGACATGCTGGGAGGCTATCACTTGCAACTTCCGCGGCGAAACGGTTTAACATCTCCAGTAGGTTATGGCTGTTGGTGATAACTATGATCCATTTGGTTGAATCTAGAGTTTTTGCTGAAGTAGTCTGCTTTAAGGTGTTGGAAATCTTGCATGATAATCGGTGTTGTGGATGTACCTTGAGTACTTGCACATTGATATCACCTAAGATCATTGTCATCAATTCTGTTGAATGCCTTTTCTGTACTCTTGCATTAGTTAGTGGCAAGGATAACGAGATCGGCAGGTCTTCTCTTCCTATCATTGAACTTAGAGATCTGATCTCATCAGATCTCACTAGGGCGGGTGAAGGGGAAGGAAGGGATGGGTGA 2226 45.96 MATTTTSIGGGGGGGGEDRVMATAQQIVKSLNTPKEVQEDMLLIFSSFDNRLSNISSLVNSGDSKREGDRYEAAEKLILRWDSGPGASRNSLNWEDSPEEAAEYLSAVDDIIQWIDELSIRSDSAEIVERAENAIQIAMSRLEDEFRHMLIRNTVPLDAEHLYGSIRKVSLSFASHDSENSDEFESFADVDRGSGIFHERGVSLGDDLRVDLINPDAVVDLKEIADRMIRSGYEKECLNVYTGVRRDALDECLVVLGVEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALEYVLPDLQAMITDEFVIEEAQGVLSRLGEAAKGTFVEFENAVRNETSKKTMLNAEIHPLTRYVMNYLTLVVVYSKTLDALLEGDDEDLQHLGGDGAENSELETMSPLPRRLFSLLSSLETNLEKKSKLYGDDSIQYIFLMNNIQYIVQKAKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLTFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEEIYRIQTGWKVADAQLREELRISVSAKALPAYRAFLGRHGSQLENTRHAGRLSLATSAAKRFNISSRLWLLVITMIHLVESRVFAEVVCFKVLEILHDNRCCGCTLSTCTLISPKIIVINSVECLFCTLALVSGKDNEIGRSSLPIIELRDLISSDLTRAGEGEGRDG 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1732404 1735154 + Cp4.1LG20g03080.1 Cpe20g00308 486937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00308 741 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 52 625 - -
Cpe20g00308 741 PANTHER EXOCYST COMPLEX PROTEIN EXO70 52 625 IPR004140 GO:0000145|GO:0006887
Cpe20g00308 741 SUPERFAMILY Cullin repeat-like 71 621 IPR016159 -
Cpe20g00308 741 Gene3D Exocyst complex component Exo70 89 627 - -
Cpe20g00308 741 Pfam Exo70 exocyst complex subunit 279 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00962 Cpe20g00308 CCT
Cpe04g01614 Cpe20g00308 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00075 Cpe-Chr20:397470 Cpe20g00308 Cpe-Chr20:1732404 1.57E-115 dispersed
Cpe20g00308 Cpe-Chr20:1732404 Cpe20g00898 Cpe-Chr20:7983527 1.62E-115 dispersed
Cpe18g00900 Cpe-Chr18:8087530 Cpe20g00308 Cpe-Chr20:1732404 0 wgd
Cpe20g00308 Cpe-Chr20:1732404 Cpe04g01614 Cpe-Chr4:12537686 0 wgd
Cpe20g00308 Cpe-Chr20:1732404 Cpe09g00962 Cpe-Chr9:8594080 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00308 K07195 - csv:101212753 1118.22