Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00356 ATGAGGGGAGGTCTATGGCAACTGGGGCAATCAATTACTCGCCGTCTTGCCCAGTCTGATAAGAAGGCTGTGGGACGTCGATTCTTTTCTGGGGAGTCTGAGCTCAAAAAAACTGTTCTATATGATTTTCATGTTGCTCATGGTGGAAAGATGGTTCCATTTGCTGGATGGAGCATGCCTATTCAATACAAGGACTCAATAATGGATTCCACTGTGAACTGTAGGCAGAATGGTGGACTGTTTGATGTCTCCCATATGTGTGGACTGAGCCTTAAGGGGAAGGATTCTATCCCTTTCCTTGAATCACTTGTTATTGCTGATGTTGCTGGTCTTGCTCCTGGAACTGGAACACTTACTGTCTTTACCAATGAAAAGGGTGGCGCCATTGATGACTCAGTGATCACCAAGGTCACAGATGACCACCTATATTTGGTTGTCAATGCGGGCTGCAGGGACAAGGATTTAGCTCACATTGAGGAGCACATGAAGGCCTTCAAGGCCAAAGGAGGCGACGTTTCTTGGCATATTCATGATGAGAGATCTCTTCTAGCTCTCCAGGGCCCTCTTGCTGCACCATCTCTTCAACAATTGACTAAGGACGACTTGAGCAAGCTTTACTTTGGTGAGTTCCGCATATTGGATATCAATGGAGCCCATTGCTATCTCACCAGGACAGGGTACACAGGTGAAGATGGATTTGAAATATCAGTGCCTTCAGAGCACGCTGTGGATCTCGCCAAAGCAATCTTGGAGAAATCAGAGGGGAAGGTAAGATTGACAGGACTGGGCGCTCGAGACAGTCTTCGGCTCGAGGCTGGCTTGTGTTTATACGGCAATGACATGGAACAACATATAACACCAGTGGAAGCAGGATTAACATGGGCCATAGGGAAAAGGAGGAGAGCAGAAGGGGGTTTTCTTGGTGCTGAGGTGATTCTGAAACAACTTGAAGAGGGCCCAGCAATAAGGCGTGTTGGGTTCTTCTCTTCAGGCCCTCCTGCAAGGAGCCACAGTGAGATTCAGAATGAGGAAGGAAAAAGCATTGGAGAAGTCACCAGTGGAGGATTTAGCCCATGCCTGAAGAAGAACATCGCTATGGGTTATGTGAAATCTGGATCTCACAAGGCTGGCACCAAAGTTAAGATCATTATCAGAGGAAAGGCCTACGATGGTGCTGTCACTAAAATGCCATTCGTTCCTACAAAATACTACAAGCCAACATAG 1224 47.06 MRGGLWQLGQSITRRLAQSDKKAVGRRFFSGESELKKTVLYDFHVAHGGKMVPFAGWSMPIQYKDSIMDSTVNCRQNGGLFDVSHMCGLSLKGKDSIPFLESLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPSLQQLTKDDLSKLYFGEFRILDINGAHCYLTRTGYTGEDGFEISVPSEHAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLTWAIGKRRRAEGGFLGAEVILKQLEEGPAIRRVGFFSSGPPARSHSEIQNEEGKSIGEVTSGGFSPCLKKNIAMGYVKSGSHKAGTKVKIIIRGKAYDGAVTKMPFVPTKYYKPT 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2002473 2006183 - Cp4.1LG20g03640.1 Cpe20g00356 486985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00356 407 SUPERFAMILY Aminomethyltransferase beta-barrel domain 312 405 IPR029043 -
Cpe20g00356 407 PANTHER AMINOMETHYLTRANSFERASE 1 407 IPR028896 -
Cpe20g00356 407 PIRSF GCST 11 407 - -
Cpe20g00356 407 Gene3D - 321 395 - -
Cpe20g00356 407 PANTHER AMINOMETHYLTRANSFERASE 1 407 - -
Cpe20g00356 407 Pfam Aminomethyltransferase folate-binding domain 40 295 IPR006222 -
Cpe20g00356 407 SUPERFAMILY Folate-binding domain 34 320 - -
Cpe20g00356 407 Gene3D Probable tRNA modification gtpase trme; domain 1 36 272 IPR027266 GO:0005515
Cpe20g00356 407 TIGRFAM gcvT: glycine cleavage system T protein 35 400 IPR006223 GO:0004047|GO:0006546
Cpe20g00356 407 Gene3D Aminomethyltransferase fragment 273 317 - -
Cpe20g00356 407 Gene3D - 86 176 - -
Cpe20g00356 407 Pfam Glycine cleavage T-protein C-terminal barrel domain 324 399 IPR013977 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00850 Cpe20g00356 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00356 Cpe-Chr20:2002473 Cpe09g00918 Cpe-Chr9:8286403 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00356 K00605 - csv:101209820 791.186