Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00363 ATGTCTTGTTCAAATCTCACCATGTTGGTGTCCTCAAAATCCACCGTCTCTGATGCCTCCTCCCTTTCATTCCGATCAGTTCTAAGCCCTTTTAACCTCCCTTCCCACAACCCAACCTCATCCTACCCTACCCGATCATGGTCAGTTACCCCAATTCATTGCGGTCTTCGGGATCTCCGAGACCGTATCGATTCAGTGAAGAACACCCAGAAGATCACTGAAGCTATGAAGCTTGTTGCTGCTGCCAAAGTCCGCAGAGCTCAAGAAGCTGTCGTTAATGGAAGACCCTTCTCAGAAGCCTTGGTTGAGGTCCTTTACAACATCAATGAGCAACTTCAAACAGAAGACGTAGATGTTCCTTTAACCAAAGTAAGACCAGTCAAGAAAGTTGCATTAGTTGTTGTCACCGGCGACAGAGGTCTTTGCGGCGGTTTCAACAACTCCATCATCAAGAAAGCTGAAGCCAGAATCTCGGAATTGAAGGAATTGGGTCTTGAGTACACTGTCATCAGCGTTGGCAAAAAGGGTAACTCCTACTTCCTCCGTCGGCCTTACATTCCGGTCGATAAGTTCCTCGAAGGCGGCACGCTTCCGACAGCCAAAGAAGCTCAAGCCATTGCTGATGATGTCTTCTCCCTGTTCATCAGTGAGGAGGTTGACAAAGTAGAGCTTTTGTACACCAAATTCGTGTCATTGGTCAAATCCGACCCTGTTATTCACACCCTTCTTCCGCTGTCGCCCAAGGGCGAGATCTGTGACATAAACGGTGTCTGTGTCGACGCCGCCGAAGATGAATTTTTCAGGTTGACAACAAAGGAAGGGAAGCTGACAGTGGAGAGGGATACGGTGAGGACAAGCACCTCAGATTTCTCCCCAATTTTGGAGTTTGAGCAAGACCCAGTTCAGATCTTGGATGCTTTATTGCCTCTGTATTTGAACAGCCAGATTTTGAGGTCACTGCAGGAGTCACTGGCCAGTGAGCTCGCAGCTAGAATGAGCGCCATGAGCAGTGCAAGTGACAATGCTTCTGAGCTGAAGAGAACTCTGTCGATGGTGTACAACAGACAGCGCCAAGCTAAGATCACTGGAGAAATATTGGAGATTGTTGCTGGTGCTAATGCCTTGACATGA 1131 48.19 MSCSNLTMLVSSKSTVSDASSLSFRSVLSPFNLPSHNPTSSYPTRSWSVTPIHCGLRDLRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKELGLEYTVISVGKKGNSYFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDTVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQILRSLQESLASELAARMSAMSSASDNASELKRTLSMVYNRQRQAKITGEILEIVAGANALT 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2046430 2047560 - Cp4.1LG20g03600.1 Cpe20g00363 486992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00363 376 Pfam ATP synthase 56 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 CDD F1-ATPase_gamma 56 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 Gene3D ATP synthase, gamma subunit, helix hairpin domain 271 375 - -
Cpe20g00363 376 Gene3D - 123 246 - -
Cpe20g00363 376 PANTHER ATP SYNTHASE GAMMA CHAIN 1 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 55 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 55 375 IPR035968 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 PRINTS ATP synthase gamma subunit signature 127 146 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 PRINTS ATP synthase gamma subunit signature 220 237 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 PRINTS ATP synthase gamma subunit signature 322 341 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 PRINTS ATP synthase gamma subunit signature 353 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 Gene3D ATP synthase, gamma subunit, helix hairpin domain 55 122 - -
Cpe20g00363 376 Hamap ATP synthase gamma chain [atpG]. 53 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Cpe20g00363 376 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 375 - -
Cpe20g00363 376 ProSitePatterns ATP synthase gamma subunit signature. 361 374 IPR023632 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00784 Cpe20g00363 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00071 Cpe-Chr20:383670 Cpe20g00363 Cpe-Chr20:2046430 1.63E-28 dispersed
Cpe20g00363 Cpe-Chr20:2046430 Cpe10g00784 Cpe-Chr10:4454695 5.79E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00363 K02115 - csv:101214408 645.966