Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00365 ATGGGTTCCAGAGCACTGGTTTTCTTCCTCTTCCTTTCCTTTCTGGGTGCGTCTTTCAGGTATGCTGCTTCTGCAGCGCTGGATGAGCAAGACAATGGTCTGGTTATGAACTTTTACAAGGATTCATGTCCCCAAGCTGAGGATATCATCAAGGAACAAGTCAGGCTTCTCTACAAGCGCCACAAGAACACCGCTTTCTCTTGGCTCAGAAACATCTTCCACGACTGTGCTGTTCAATCCTGTGATGCATCTCTGCTGCTGGATTCCACCAGAAGGAGCCTGTCTGAGAAGGAGACAGACAGGAGCTTTGGACTTAGGAACTTTAGGTATATTGAGACTATTAAGGAGGCTTTGGAGAGGGAGTGCCCTGGAGTTGTGTCCTGTGCGGACATCCTTGTCTTGTCCGCTAGAGATGGCATTGTTTCTCTTGGAGGGCCTTATATCCCACTTAAGACAGGTAGAAGAGATGGAAGGAGAAGCAGAGCTGATATTTTGGAAGAGTATCTTCCAGATCATAATGAAAGCATGTCTGTTGTTCTTGAGAGATTTGCAGCCATGGGCATTGACACCCCTGGAGTAGACCCTGCGCTGAACCCAGGGCATGTGGAGCACATGTTGTACAAGTGTCCTGATGAGATCCCAGACCCCAAGGCTGTGCAGTACGTGAGGAACGACCGTGGCACACCCATGATTCTGGACAACAACTACTACAGAAACATACTGGACAACAAAGGGTTGCTGATAGTGGACCACCAGCTAGCCACAGACAAGAGAACGAAGCCATATGTGAAGAAAATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCAAGAGCCATTACCATCCTTTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGCAATGTTGCCAACAAGCTGCACTGA 927 48.11 MGSRALVFFLFLSFLGASFRYAASAALDEQDNGLVMNFYKDSCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADILEEYLPDHNESMSVVLERFAAMGIDTPGVDPALNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2054530 2056592 + Cp4.1LG20g03530.1 Cpe20g00365 486994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00365 308 CDD secretory_peroxidase 33 303 IPR033905 GO:0004601|GO:0042744
Cpe20g00365 308 ProSiteProfiles Plant heme peroxidase family profile. 33 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 Pfam Peroxidase 51 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PANTHER PEROXIDASE 25-RELATED 22 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PANTHER PEROXIDASE 25-RELATED 191 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 Gene3D - 285 305 - -
Cpe20g00365 308 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Haem peroxidase superfamily signature 225 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 Gene3D Peroxidase, domain 2 170 190 - -
Cpe20g00365 308 SUPERFAMILY Heme-dependent peroxidases 34 305 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 Gene3D Peroxidase, domain 2 192 284 - -
Cpe20g00365 308 PANTHER PEROXIDASE 42 191 304 - -
Cpe20g00365 308 PANTHER PEROXIDASE 42 22 193 - -
Cpe20g00365 308 Gene3D - 37 169 - -
Cpe20g00365 308 PRINTS Plant peroxidase signature 279 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe20g00365 308 PRINTS Plant peroxidase signature 239 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00207 Cpe20g00365 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01105 Cpe-Chr8:8357747 Cpe20g00365 Cpe-Chr20:2054530 4.62E-79 dispersed
Cpe10g00207 Cpe-Chr10:1192530 Cpe20g00365 Cpe-Chr20:2054530 8.66E-110 dispersed
Cpe20g00365 Cpe-Chr20:2054530 Cpe04g00738 Cpe-Chr4:7230845 5.84E-43 dispersed
Cpe20g00365 Cpe-Chr20:2054530 Cpe03g00172 Cpe-Chr3:851765 4.26E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00365 K00430 - csv:101214168 561.992