Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00435 ATGGCCGCTCTGAAACTCCCAATTCTTCTCCTCTCTTTCCCCCTTCTTTTCTGCTCCATATCCGCCCTTGATTTCGTCTTCAACGGCTTCAATTCCACCGATGTCTTCCTCTACGGCAACGCCACCATTGAATCCCGCATCCTCGCCCTCACCAACCAAACCAGTTTCTCAATCGGTCGCGCTCTGTACCCTTCCAAGATCCCCACTAGGGCACCCAATTCCTCCCGTCTCTACTCCTTCTCCACTTCTTTCATCTTCGCCATGGCCCCTTACAGGGATACCCTTCCCGGACATGGCTTGGTTTTTATCTTTGTTCCGGAGACTGGGATCCACGGAACTGCCTCCGCTCAGAATTTAGGGTTTTTGAACTTCACCCTTAATGGGAACCCTAATAACCATGTCTTTGGAATTGAGTTTGATGTGTTTGATAATGAGGAATTCAATGACCCCGACGACAATCATGTGGGAATCGACTTGAATTCCTTGACGTCTACCGCTACCGGAGAAGCTGGGTTTTGGTCCGACGATGGCTCGTTTAATAGGTTCCGGCTTAATAGCGGCGAAAATTATCAAGTCTGGATTGATTATTCCGATTTTCAGATGAATGTTACGATGGCTCCGGCGGGGATGAAGAGGCCACGGCGGCCGTTGATTAACGCCACTCTGAATCTCTCCCATATTTTCACCGACGAAATGTATGTGGGGTTCACGAGCTCTACAGGGCAGTTGGTTCAAGGCCACAACATTTTAGCCTGGAGTTTCAGTAACTCTAATTTTTCGTTGAGCGAGAGTTTGATTACCGCTGGATTGCCCTCCTTCGTCCTCCCAAAAGACCCGATTACTAAATCCAAGTGGATCATCGCCGGAGTGACGGCCGGCGGATTCCTATTCGTTTTCTTCATAGCTACGATTTTGGGGATTTTGATTGCAGACCACCGGAGGAGAGCGAGGGCAAGAGCGGAAATGGAAGACTGGGAATTGGAGTATTGGCCACACCGAATTACATATCAAGAAATCGAATCGGCAACCAAAGGGTTTGCAGAAGAAAATGTCATCGGAGTTGGAGGGAATGGGAAGGTGCACAAAGGGGTCTTGGCTGGAGGAGGTTCGGAAGTTGCAGTGAAACGAATTTCTCACGAAAACGATGGGATGCGAGAGTTCTTAGCTGAAATCTCGAGTATAGGAAGATTGAAGCACAGAAATCTAGTCAGTTTGAGGGGTTGGTGTAAGAAAGAGACGGGGAATTTCTTACTTGTCTATGATTACATGGAAAATGGAAGTTTAGACAAATGGGTATTTGATTGCGACGAGAGAAGCATGTTGAGCTGCGAGGATCGAATTCGAGTATTGAAAAACGTAGCTTCGGGGGTTTTGTATTTACACGAAGGATGGGAATCCAAGGTCCTCCATAGGGACATAAAAGCCAGCAATGTGTTGCTAGACAAAGACATGAATGGAAGACTAGGAGATTTCGGTTTGGCTCGAGTCCATAGCCACAACCAAGTAGCTAGCACGACTCGAATCGTTGGCACCATGGGCTACATCGCGCCAGAGTTGATTCGAACGGGACGAGCCTCGACTCAATCAGACGTATTTGGTTTTGGTGTTTTGATTTTGGAAGTGATGTGTGGGAGGAGACCAATAGAGGAAGGGAAGCCACCATTAGTGGATTGGGTTCGACGATTGGCGGTTGAAGGGGAGATCACAGCAGCAGTCGACGAGCGACTGAGGAAGAAGGGCGGGTGGAACGAGGAGGAAGTCGAGAGAGTGTTACATTTAGGATTGTTATGTGTACATCCCGACCCGAAAACTCGACCGAAGATGAGGCAAATTGTGAAAGTTTTGGAAGGAAAAATAGAGGTGGATGAGAATGAGAGTGAGAGCATGAATGCTTATTTGCTTGAAAGATTGAAGTCGCAAGGAATGTGGTGTGATTCTGGCGTTGGTTTTGGGCATAAACATCCAACATTTGAGGATTTTCTTCAGTCTTCTTCAACCTCCCTGTCTTGGTCCGATTCCATTGTAGTGGGCAGGTGA 2037 47.72 MAALKLPILLLSFPLLFCSISALDFVFNGFNSTDVFLYGNATIESRILALTNQTSFSIGRALYPSKIPTRAPNSSRLYSFSTSFIFAMAPYRDTLPGHGLVFIFVPETGIHGTASAQNLGFLNFTLNGNPNNHVFGIEFDVFDNEEFNDPDDNHVGIDLNSLTSTATGEAGFWSDDGSFNRFRLNSGENYQVWIDYSDFQMNVTMAPAGMKRPRRPLINATLNLSHIFTDEMYVGFTSSTGQLVQGHNILAWSFSNSNFSLSESLITAGLPSFVLPKDPITKSKWIIAGVTAGGFLFVFFIATILGILIADHRRRARARAEMEDWELEYWPHRITYQEIESATKGFAEENVIGVGGNGKVHKGVLAGGGSEVAVKRISHENDGMREFLAEISSIGRLKHRNLVSLRGWCKKETGNFLLVYDYMENGSLDKWVFDCDERSMLSCEDRIRVLKNVASGVLYLHEGWESKVLHRDIKASNVLLDKDMNGRLGDFGLARVHSHNQVASTTRIVGTMGYIAPELIRTGRASTQSDVFGFGVLILEVMCGRRPIEEGKPPLVDWVRRLAVEGEITAAVDERLRKKGGWNEEEVERVLHLGLLCVHPDPKTRPKMRQIVKVLEGKIEVDENESESMNAYLLERLKSQGMWCDSGVGFGHKHPTFEDFLQSSSTSLSWSDSIVVGR 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2503213 2505249 + Cp4.1LG20g04380.1 Cpe20g00435 487064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00435 678 CDD lectin_legume_LecRK_Arcelin_ConA 23 252 IPR001220 GO:0030246
Cpe20g00435 678 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Cpe20g00435 678 Pfam Legume lectin domain 23 258 IPR001220 GO:0030246
Cpe20g00435 678 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Cpe20g00435 678 Gene3D Transferase(Phosphotransferase) domain 1 423 638 - -
Cpe20g00435 678 Pfam Protein kinase domain 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00435 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 262 IPR013320 -
Cpe20g00435 678 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 8 670 - -
Cpe20g00435 678 ProSiteProfiles Protein kinase domain profile. 346 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00435 678 CDD STKc_IRAK 352 617 - -
Cpe20g00435 678 PANTHER - 8 670 - -
Cpe20g00435 678 Gene3D - 21 264 - -
Cpe20g00435 678 SMART serkin_6 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00435 678 Gene3D Phosphorylase Kinase; domain 1 309 422 - -
Cpe20g00435 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00899 Cpe-Chr10:5048944 Cpe20g00435 Cpe-Chr20:2503213 2.92E-162 dispersed
Cpe18g00867 Cpe-Chr18:7950210 Cpe20g00435 Cpe-Chr20:2503213 2.12E-169 dispersed
Cpe15g00808 Cpe-Chr15:8086557 Cpe20g00435 Cpe-Chr20:2503213 0 wgd
Cpe20g00435 Cpe-Chr20:2503213 Cpe04g00781 Cpe-Chr4:7448701 0 wgd
Cpe20g00435 Cpe-Chr20:2503213 Cpe09g00840 Cpe-Chr9:7766419 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63086 PF00069 Pkinase 1.20E-46 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00435 - - csv:101222577 1123.23