Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00481 ATGACATCGGGGACGAGAATGCCCACTTGGAAGGAGAGGGAGAACAACAAGCGCCGTGAGAGGCGCCGACGTGCCATCGCCGCTAAGATCTTTCTTGGCCTGCGAATGTACGGAAACTATAAGCTTCCTAAGCACTGCGATAATAATGAGGTCCTCAAAGCCCTCTGTGTTGAAGCTGGGTGGACTGTAGAGGAAGACGGCACTACCTATCGGAAGGGATGCAAGCCTGTGGAACGCGATATCATGGGCGGATCAGCTTCTGCAAGTCCATGTTCATCTTACCAGCCGAGCCCATGTGCATCTTATAACCCAAGTCCTGCGTCTTCTTCCTTCCCAAGCCCTTCCCGTTACGCCATTAAAGGCAATGACAATGCTGCTGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTCTCCTCAGCTTCATCACCAGCCTCCTCCAGGCTGCCTCACCATCTTTATATTACTGGTGGCTCCATAAGTGCACCTGTTACCCCTCCGTCGAGCTCCCCAACTGCTCGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCAGCACAGCGCTTCTCATGTTTGCCTGCATCGACCCCTCCGAGCCCTGGGCGTCAGGTGTTGGCTGATTCAGCATGGTTTGATAGTATGCGGATTCCTCAAAGTGGACCATCGTCACCAACCTTCAGCCTTGTGGCTAGGAATCCTTTTGGATTTAAGGAGGCAATGTCTGCTGGAGGTCCTTCATTCGGATTTAAGGAGGCAATGTCAAATCCAATGTCTGCTGGAGGGTCTCGTAATTGGACTCCTACACAGAGCGGGACGTGCTCGCCCACGGTTGCTGCGGGCACCGATCATACTTCAGATGTTCCTATGACGGATGGGACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCGATTGGGTTGGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTTACACTTGGGAATTCAAGGACGAGGTGA 1029 52.38 MTSGTRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCVEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPCASYNPSPASSSFPSPSRYAIKGNDNAADPNSLIPWLKNLSSASSPASSRLPHHLYITGGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADSAWFDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGPSFGFKEAMSNPMSAGGSRNWTPTQSGTCSPTVAAGTDHTSDVPMTDGTAAEFAFGSCSIGLVKPWEGERIHEECISDDLELTLGNSRTR 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2783513 2787594 + Cp4.1LG20g04850.1 Cpe20g00481 487110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00481 342 MobiDBLite consensus disorder prediction 158 186 - -
Cpe20g00481 342 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Cpe20g00481 342 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 342 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cpe20g00481 342 MobiDBLite consensus disorder prediction 1 21 - -
Cpe20g00481 342 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 342 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00790 Cpe20g00481 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00599 Cpe-Chr1:3456674 Cpe20g00481 Cpe-Chr20:2783513 2.71E-136 dispersed
Cpe07g00438 Cpe-Chr7:2812803 Cpe20g00481 Cpe-Chr20:2783513 7.82E-41 dispersed
Cpe11g00187 Cpe-Chr11:1017927 Cpe20g00481 Cpe-Chr20:2783513 4.85E-38 dispersed
Cpe14g00363 Cpe-Chr14:2208805 Cpe20g00481 Cpe-Chr20:2783513 4.35E-126 dispersed
Cpe19g00793 Cpe-Chr19:5997709 Cpe20g00481 Cpe-Chr20:2783513 5.01E-49 dispersed
Cpe20g00481 Cpe-Chr20:2783513 Cpe01g00537 Cpe-Chr1:3085495 5.20E-15 dispersed
Cpe20g00481 Cpe-Chr20:2783513 Cpe09g00790 Cpe-Chr9:7311979 9.06E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51133 PF05687 BES1_N 5.90E-65 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00481 - - csv:101204637 535.028