Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe20g00489 | ATGGTAGTCGAAGAGACGATCAAAGCTACATCGATGGAAGATCTTTCTAATTCCATCGCAAATCAAAACCCTAGGGGACGAGGCAATGAGGAAGATGAGGATCTTGAGGAAGGAGAGATCGTCGGCGACCACGACTTGGACTCCTCCAATTTATCGGCAGCGATAGTGCATCAGCCTCACCCTCTGGAGCACCCTTGGACTTTTTGGTTCGATAACCCATCCGCCAAGTCCAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATATATACCTTCTCTACCGTGGAGGAGTTCTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTTAAACATAAAATTGAGCCTAAATGGGAGGATCCTGTCTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTATACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCTGTTGTCAACGTTAGATCTGGGCAGGATAAAATATCGATTTGGACTAAGAATGCTTCCAATGAAGCGGCGCAGGCGAGCATTGGGAAGCAGTGGAAGGAGTTTCTTGATTACAATGATAGCATTGGCTTTATATTCCACGACGATGCAAAGAAGTTTGACAGGCATGCGAAGAACCGATATACGGTGTAA | 708 | 46.19 | MVVEETIKATSMEDLSNSIANQNPRGRGNEEDEDLEEGEIVGDHDLDSSNLSAAIVHQPHPLEHPWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYTV | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 2828156 | 2832984 | - | Cp4.1LG20g04920.1 | Cpe20g00489 | 487118 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe20g00489 | 235 | MobiDBLite | consensus disorder prediction | 10 | 25 | - | - | |
Cpe20g00489 | 235 | Pfam | Eukaryotic initiation factor 4E | 61 | 213 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Cpe20g00489 | 235 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 51 | 235 | IPR023398 | - | |
Cpe20g00489 | 235 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cpe20g00489 | 235 | SUPERFAMILY | eIF4e-like | 56 | 231 | IPR023398 | - | |
Cpe20g00489 | 235 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 3 | 235 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Cpe20g00489 | 235 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 | 3 | 235 | - | - | |
Cpe20g00489 | 235 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 116 | 139 | IPR019770 | GO:0003723|GO:0003743|GO:0005737|GO:0006413 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe09g00780 | Cpe20g00489 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00945 | Cpe-Chr3:6972097 | Cpe20g00489 | Cpe-Chr20:2828156 | 1.54E-25 | dispersed | |
Cpe12g00123 | Cpe-Chr12:772693 | Cpe20g00489 | Cpe-Chr20:2828156 | 4.54E-73 | dispersed | |
Cpe17g00212 | Cpe-Chr17:1370438 | Cpe20g00489 | Cpe-Chr20:2828156 | 6.91E-75 | dispersed | |
Cpe20g00489 | Cpe-Chr20:2828156 | Cpe09g00780 | Cpe-Chr9:7245973 | 6.06E-161 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe20g00489 | K03259 | - | csv:101206312 | 461.455 |