Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00489 ATGGTAGTCGAAGAGACGATCAAAGCTACATCGATGGAAGATCTTTCTAATTCCATCGCAAATCAAAACCCTAGGGGACGAGGCAATGAGGAAGATGAGGATCTTGAGGAAGGAGAGATCGTCGGCGACCACGACTTGGACTCCTCCAATTTATCGGCAGCGATAGTGCATCAGCCTCACCCTCTGGAGCACCCTTGGACTTTTTGGTTCGATAACCCATCCGCCAAGTCCAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATATATACCTTCTCTACCGTGGAGGAGTTCTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTTAAACATAAAATTGAGCCTAAATGGGAGGATCCTGTCTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTATACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCTGTTGTCAACGTTAGATCTGGGCAGGATAAAATATCGATTTGGACTAAGAATGCTTCCAATGAAGCGGCGCAGGCGAGCATTGGGAAGCAGTGGAAGGAGTTTCTTGATTACAATGATAGCATTGGCTTTATATTCCACGACGATGCAAAGAAGTTTGACAGGCATGCGAAGAACCGATATACGGTGTAA 708 46.19 MVVEETIKATSMEDLSNSIANQNPRGRGNEEDEDLEEGEIVGDHDLDSSNLSAAIVHQPHPLEHPWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYTV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2828156 2832984 - Cp4.1LG20g04920.1 Cpe20g00489 487118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00489 235 MobiDBLite consensus disorder prediction 10 25 - -
Cpe20g00489 235 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cpe20g00489 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
Cpe20g00489 235 MobiDBLite consensus disorder prediction 1 36 - -
Cpe20g00489 235 SUPERFAMILY eIF4e-like 56 231 IPR023398 -
Cpe20g00489 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 3 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cpe20g00489 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 3 235 - -
Cpe20g00489 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00780 Cpe20g00489 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00945 Cpe-Chr3:6972097 Cpe20g00489 Cpe-Chr20:2828156 1.54E-25 dispersed
Cpe12g00123 Cpe-Chr12:772693 Cpe20g00489 Cpe-Chr20:2828156 4.54E-73 dispersed
Cpe17g00212 Cpe-Chr17:1370438 Cpe20g00489 Cpe-Chr20:2828156 6.91E-75 dispersed
Cpe20g00489 Cpe-Chr20:2828156 Cpe09g00780 Cpe-Chr9:7245973 6.06E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00489 K03259 - csv:101206312 461.455