Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00503 ATGTGGCTGGTGGCTCTAGTCATTTACTCTGCTTGGATTTGTCCTTTCGAATTCGCATTCCTTCCCTACAAACAAAATGCTCTGTTCATCATAGATCACTTCGTCAATGCCTTCTTCGCCGTCGATATCGTTTTGACTTTCTTCGTCGCCTATCTTGACTCTCAATCTTATCTTCTCGTTGACCACCCCAAGAAAATTGCAGTCAGGTATTTATCGACTTGGTTTATTTTCGACGTTTGTTCGACGGCGCCATTGCAGTCGATTAGTTTCTTGTTCACCAATCAAAGTGGGGAAGTTGGGTTTAAGCTTCTGAATATGCTCCGGCTATGGCGGCTCCGACGGGTCAGCTCTCTCTTTGCAAGGCTTGAAAAGGACATCAGGTTCAATTATTTCTGGACCCGTTGCACAAAGTTGATTTCTGTAACGTTATTTGCAGTACATTGTGCTGGGTGCTTCAATTTCTTAATAGCCGACAAATATCCGGACCCAAAACGAACATGGATTGGTGCAGTGGATCCAAATTTCAAGGAAGATAGCCTATGGAACCTTTATATTACTGCAATTTACTGGTCCATTACCACCTTAACCACCACTGGCTATGGCGATCTCCATGCAGAGAACCCCAGAGAAATGCTTTTTGCCATCTTTTACATGCTCTTCAACTTAGGCTTGACTTCTTATCTCATCGGCAACATGACGAATCTCGTCGTCCATTGGACGAGTCGCACTCGAAACTTCAGGGATTCGGTACGAGCTGCCATGGAGTTCGCGTCGAGAAATCAGCTACCGAACCCCATACAAGACCAGATGCTGTCTCATATATGTCTCAAATTTAGAACCGAAGGGCTGAAGCAGCAAGACACATTGAATGACCTTCCAAAGGCCATTAGAGTCTCCATAGCTCACTATCTCTTTTATCCCATTGTTCAGAAGGCCTACCTCTTTGAAGGAGTTTCTCATGACTTCCTTTTCCAATTGGTCTCAGATGTGGAGGCTGAGTATTTCCCACCAAAGGAAGATGTAATACTCCAAAGTGAAGCTCAAACGGATCTCTATATATTGGTTTCAGGCAGTGTGGATTTAATATCCAAAATTGATGGGCATGATCAAGTTATTGGAAGAGCAACAGGTGGAGATACATTCGGAGAATTTGGAGTTTTATGTCAAAAGCCGCAGCCTTTGACAGTCAGAACAACAAATCTTTCGCAAATTTTAAGGATCAAGAGAGCTTCTTTGTTGTATATTATTCAATCAAACACAGATGATGGGAATATTATCATGAACAATTTTTTCATGAAAATGAAGGAATATGAGAGAATAATGGGGGATGTTTGGTGTGATGGTGGGCTAAAGAAGCTTGGAGATGAGGATGAAAATTTGGGAAGCTTAGATGAACATAGAATTGAGTTTGATGAACAGCTTGAAGGAGGTGAAAACGACATTAATTTGTCTCATAACAACAAGTTACCAGCAAGAGATGGAGGTTTTCGGTCGGATTTTATTAGTTCCTCGGTAGAAAACTTGCCCACGAGCTCTTACTCGAATGTCTCAAGACAAATCAAGAAAAGGGTTACTGTATTTATACAGCCTCGAGATAGAAGCACGGTTGAAAGTCGATATGGAAAGTTAATGCTTCTCCCGAATTCGATCGAAGAGCTCTGTAAAGTTGCTGGTGAGAAGTTTGGAAGGGAAATGCCCACAAAAGTGATGAATGCAGATAATTCAGAAATTGATGATATAAATGTGATTCGTGACGGTGACCATTTGTTTCTTCTTTATAATAATGATATCGAAAAATGTGGTCTCAAATGA 1812 41.45 MWLVALVIYSAWICPFEFAFLPYKQNALFIIDHFVNAFFAVDIVLTFFVAYLDSQSYLLVDHPKKIAVRYLSTWFIFDVCSTAPLQSISFLFTNQSGEVGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNFLIADKYPDPKRTWIGAVDPNFKEDSLWNLYITAIYWSITTLTTTGYGDLHAENPREMLFAIFYMLFNLGLTSYLIGNMTNLVVHWTSRTRNFRDSVRAAMEFASRNQLPNPIQDQMLSHICLKFRTEGLKQQDTLNDLPKAIRVSIAHYLFYPIVQKAYLFEGVSHDFLFQLVSDVEAEYFPPKEDVILQSEAQTDLYILVSGSVDLISKIDGHDQVIGRATGGDTFGEFGVLCQKPQPLTVRTTNLSQILRIKRASLLYIIQSNTDDGNIIMNNFFMKMKEYERIMGDVWCDGGLKKLGDEDENLGSLDEHRIEFDEQLEGGENDINLSHNNKLPARDGGFRSDFISSSVENLPTSSYSNVSRQIKKRVTVFIQPRDRSTVESRYGKLMLLPNSIEELCKVAGEKFGREMPTKVMNADNSEIDDINVIRDGDHLFLLYNNDIEKCGLK 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2920730 2924017 + Cp4.1LG20g05050.1 Cpe20g00503 487132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00503 603 Pfam Cyclic nucleotide-binding domain 334 419 IPR000595 -
Cpe20g00503 603 SUPERFAMILY cAMP-binding domain-like 241 430 IPR018490 -
Cpe20g00503 603 PANTHER POTASSIUM CHANNEL AKT1 1 592 IPR045319 GO:0005249|GO:0006813
Cpe20g00503 603 Pfam KHA, dimerisation domain of potassium ion channel 522 591 IPR021789 -
Cpe20g00503 603 CDD CAP_ED 314 427 IPR000595 -
Cpe20g00503 603 SUPERFAMILY Voltage-gated potassium channels 3 236 - -
Cpe20g00503 603 ProSiteProfiles KHA domain profile. 523 603 IPR021789 -
Cpe20g00503 603 PANTHER POTASSIUM CHANNEL KAT1 1 592 - -
Cpe20g00503 603 SMART cnmp_10 314 431 IPR000595 -
Cpe20g00503 603 Pfam Ion transport protein 3 243 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe20g00503 603 Gene3D Jelly Rolls 281 441 IPR014710 -
Cpe20g00503 603 PRINTS EAG/ELK/ERG potassium channel family signature 228 237 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe20g00503 603 PRINTS EAG/ELK/ERG potassium channel family signature 32 42 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe20g00503 603 PRINTS EAG/ELK/ERG potassium channel family signature 184 201 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe20g00503 603 PRINTS EAG/ELK/ERG potassium channel family signature 9 16 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe20g00503 603 PRINTS EAG/ELK/ERG potassium channel family signature 210 221 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe20g00503 603 PRINTS EAG/ELK/ERG potassium channel family signature 43 52 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe20g00503 603 ProSiteProfiles cAMP/cGMP binding motif profile. 314 433 IPR000595 -
Cpe20g00503 603 Gene3D - 1 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00423 Cpe-Chr2:2340360 Cpe20g00503 Cpe-Chr20:2920730 0 dispersed
Cpe04g01174 Cpe-Chr4:10007142 Cpe20g00503 Cpe-Chr20:2920730 1.36E-06 dispersed
Cpe14g00320 Cpe-Chr14:1896169 Cpe20g00503 Cpe-Chr20:2920730 3.84E-135 dispersed
Cpe18g00465 Cpe-Chr18:5605324 Cpe20g00503 Cpe-Chr20:2920730 3.68E-07 dispersed
Cpe20g00503 Cpe-Chr20:2920730 Cpe09g00766 Cpe-Chr9:7142690 2.69E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00503 K21867 - csv:101215858 991.49