Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe20g00503 | ATGTGGCTGGTGGCTCTAGTCATTTACTCTGCTTGGATTTGTCCTTTCGAATTCGCATTCCTTCCCTACAAACAAAATGCTCTGTTCATCATAGATCACTTCGTCAATGCCTTCTTCGCCGTCGATATCGTTTTGACTTTCTTCGTCGCCTATCTTGACTCTCAATCTTATCTTCTCGTTGACCACCCCAAGAAAATTGCAGTCAGGTATTTATCGACTTGGTTTATTTTCGACGTTTGTTCGACGGCGCCATTGCAGTCGATTAGTTTCTTGTTCACCAATCAAAGTGGGGAAGTTGGGTTTAAGCTTCTGAATATGCTCCGGCTATGGCGGCTCCGACGGGTCAGCTCTCTCTTTGCAAGGCTTGAAAAGGACATCAGGTTCAATTATTTCTGGACCCGTTGCACAAAGTTGATTTCTGTAACGTTATTTGCAGTACATTGTGCTGGGTGCTTCAATTTCTTAATAGCCGACAAATATCCGGACCCAAAACGAACATGGATTGGTGCAGTGGATCCAAATTTCAAGGAAGATAGCCTATGGAACCTTTATATTACTGCAATTTACTGGTCCATTACCACCTTAACCACCACTGGCTATGGCGATCTCCATGCAGAGAACCCCAGAGAAATGCTTTTTGCCATCTTTTACATGCTCTTCAACTTAGGCTTGACTTCTTATCTCATCGGCAACATGACGAATCTCGTCGTCCATTGGACGAGTCGCACTCGAAACTTCAGGGATTCGGTACGAGCTGCCATGGAGTTCGCGTCGAGAAATCAGCTACCGAACCCCATACAAGACCAGATGCTGTCTCATATATGTCTCAAATTTAGAACCGAAGGGCTGAAGCAGCAAGACACATTGAATGACCTTCCAAAGGCCATTAGAGTCTCCATAGCTCACTATCTCTTTTATCCCATTGTTCAGAAGGCCTACCTCTTTGAAGGAGTTTCTCATGACTTCCTTTTCCAATTGGTCTCAGATGTGGAGGCTGAGTATTTCCCACCAAAGGAAGATGTAATACTCCAAAGTGAAGCTCAAACGGATCTCTATATATTGGTTTCAGGCAGTGTGGATTTAATATCCAAAATTGATGGGCATGATCAAGTTATTGGAAGAGCAACAGGTGGAGATACATTCGGAGAATTTGGAGTTTTATGTCAAAAGCCGCAGCCTTTGACAGTCAGAACAACAAATCTTTCGCAAATTTTAAGGATCAAGAGAGCTTCTTTGTTGTATATTATTCAATCAAACACAGATGATGGGAATATTATCATGAACAATTTTTTCATGAAAATGAAGGAATATGAGAGAATAATGGGGGATGTTTGGTGTGATGGTGGGCTAAAGAAGCTTGGAGATGAGGATGAAAATTTGGGAAGCTTAGATGAACATAGAATTGAGTTTGATGAACAGCTTGAAGGAGGTGAAAACGACATTAATTTGTCTCATAACAACAAGTTACCAGCAAGAGATGGAGGTTTTCGGTCGGATTTTATTAGTTCCTCGGTAGAAAACTTGCCCACGAGCTCTTACTCGAATGTCTCAAGACAAATCAAGAAAAGGGTTACTGTATTTATACAGCCTCGAGATAGAAGCACGGTTGAAAGTCGATATGGAAAGTTAATGCTTCTCCCGAATTCGATCGAAGAGCTCTGTAAAGTTGCTGGTGAGAAGTTTGGAAGGGAAATGCCCACAAAAGTGATGAATGCAGATAATTCAGAAATTGATGATATAAATGTGATTCGTGACGGTGACCATTTGTTTCTTCTTTATAATAATGATATCGAAAAATGTGGTCTCAAATGA | 1812 | 41.45 | MWLVALVIYSAWICPFEFAFLPYKQNALFIIDHFVNAFFAVDIVLTFFVAYLDSQSYLLVDHPKKIAVRYLSTWFIFDVCSTAPLQSISFLFTNQSGEVGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNFLIADKYPDPKRTWIGAVDPNFKEDSLWNLYITAIYWSITTLTTTGYGDLHAENPREMLFAIFYMLFNLGLTSYLIGNMTNLVVHWTSRTRNFRDSVRAAMEFASRNQLPNPIQDQMLSHICLKFRTEGLKQQDTLNDLPKAIRVSIAHYLFYPIVQKAYLFEGVSHDFLFQLVSDVEAEYFPPKEDVILQSEAQTDLYILVSGSVDLISKIDGHDQVIGRATGGDTFGEFGVLCQKPQPLTVRTTNLSQILRIKRASLLYIIQSNTDDGNIIMNNFFMKMKEYERIMGDVWCDGGLKKLGDEDENLGSLDEHRIEFDEQLEGGENDINLSHNNKLPARDGGFRSDFISSSVENLPTSSYSNVSRQIKKRVTVFIQPRDRSTVESRYGKLMLLPNSIEELCKVAGEKFGREMPTKVMNADNSEIDDINVIRDGDHLFLLYNNDIEKCGLK | 603 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 2920730 | 2924017 | + | Cp4.1LG20g05050.1 | Cpe20g00503 | 487132 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe20g00503 | 603 | Pfam | Cyclic nucleotide-binding domain | 334 | 419 | IPR000595 | - | |
Cpe20g00503 | 603 | SUPERFAMILY | cAMP-binding domain-like | 241 | 430 | IPR018490 | - | |
Cpe20g00503 | 603 | PANTHER | POTASSIUM CHANNEL AKT1 | 1 | 592 | IPR045319 | GO:0005249|GO:0006813 | |
Cpe20g00503 | 603 | Pfam | KHA, dimerisation domain of potassium ion channel | 522 | 591 | IPR021789 | - | |
Cpe20g00503 | 603 | CDD | CAP_ED | 314 | 427 | IPR000595 | - | |
Cpe20g00503 | 603 | SUPERFAMILY | Voltage-gated potassium channels | 3 | 236 | - | - | |
Cpe20g00503 | 603 | ProSiteProfiles | KHA domain profile. | 523 | 603 | IPR021789 | - | |
Cpe20g00503 | 603 | PANTHER | POTASSIUM CHANNEL KAT1 | 1 | 592 | - | - | |
Cpe20g00503 | 603 | SMART | cnmp_10 | 314 | 431 | IPR000595 | - | |
Cpe20g00503 | 603 | Pfam | Ion transport protein | 3 | 243 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cpe20g00503 | 603 | Gene3D | Jelly Rolls | 281 | 441 | IPR014710 | - | |
Cpe20g00503 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 228 | 237 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe20g00503 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 32 | 42 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe20g00503 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 184 | 201 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe20g00503 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 9 | 16 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe20g00503 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 210 | 221 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe20g00503 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 43 | 52 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe20g00503 | 603 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 314 | 433 | IPR000595 | - | |
Cpe20g00503 | 603 | Gene3D | - | 1 | 237 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00423 | Cpe-Chr2:2340360 | Cpe20g00503 | Cpe-Chr20:2920730 | 0 | dispersed | |
Cpe04g01174 | Cpe-Chr4:10007142 | Cpe20g00503 | Cpe-Chr20:2920730 | 1.36E-06 | dispersed | |
Cpe14g00320 | Cpe-Chr14:1896169 | Cpe20g00503 | Cpe-Chr20:2920730 | 3.84E-135 | dispersed | |
Cpe18g00465 | Cpe-Chr18:5605324 | Cpe20g00503 | Cpe-Chr20:2920730 | 3.68E-07 | dispersed | |
Cpe20g00503 | Cpe-Chr20:2920730 | Cpe09g00766 | Cpe-Chr9:7142690 | 2.69E-25 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe20g00503 | K21867 | - | csv:101215858 | 991.49 |