Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00513 ATGCTCGGAGCCCTGGGGTGCGTGTTCTCGGAGCTTCTATCCCGCAACGGCGTGAAGTTTGGGGAAGCGGTGTGGTTCAAGGCAGGTTCACAGATCTTCAACGAAGGTGGGCTCGACTACTTGGGGAACCCGAGCTTGATCCACGCTCAAAGCATTCTAGCCATTTGGGCATCGCAGGTGGTTCTGATGGGGGCGGTCGAGGGATACCGTATTGCCAGTGGGCCATTGGGGGAGGGCCCATTGGAGAATCTTGCCGATCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCCACCAACTTTGCCCCTGGAAAATAA 324 56.48 MLGALGCVFSELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIASGPLGEGPLENLADHLADPVNNNAWAYATNFAPGK 107
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2981021 2982740 + Cp4.1LG20g05060.1 Cpe20g00513 487142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00513 107 Gene3D Chlorophyll a/b binding protein domain 1 79 - -
Cpe20g00513 107 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 78 - -
Cpe20g00513 107 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 77 107 - -
Cpe20g00513 107 Pfam Chlorophyll A-B binding protein 1 76 IPR022796 -
Cpe20g00513 107 SUPERFAMILY Chlorophyll a-b binding protein 1 104 - -
Cpe20g00513 107 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 78 IPR001344 GO:0009765|GO:0016020
Cpe20g00513 107 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 77 107 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g01123 Cpe-Chr19:7560916 Cpe20g00513 Cpe-Chr20:2981021 1.58E-59 dispersed
Cpe20g00513 Cpe-Chr20:2981021 Cpe01g00833 Cpe-Chr1:4941837 1.66E-35 dispersed
Cpe20g00513 Cpe-Chr20:2981021 Cpe03g00823 Cpe-Chr3:5135966 1.40E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00513 K08912 - csv:101203342 189.889