Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00557 ATGGACAATGGTGATATTGAGAGCGGGGAAGAGGAGTTTCATGGGCAGAGGGGAAGGAAGTACCGACCTGTGGAAGCTCATGATCGTGCTGTTCTTGAAATGTCTTCTATGGATCCGGGGGCATCATCTTCTTCGTCCTCCGTTCCCCCCATTTCTCTGAAGAATGTAAAAGTGGATTCTCAGACGGGCACTGAAACAGATGGGAATTCTCCTACTCGTATTGAAGTTGATGGCCCCCAGCGAGAATCCAAGCTGGAGTTTTTTGGTTTTGATTCTCTTGTCAATATTCTTGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCACCTACTAGTCCTCGAGATGGTGAGAACATTTCTATCACTCAAGGATTGCCAAAGACCACTGAAGTCAAATCGGGTACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTTTATTCGATTTACTTGGATTGTTGGCATGGCTGGTATTGGTGAGTCATTAGTGCTGGTGTCGTTTTGTGGTTTATGTACGTTCTTGACTTCGATCTCACTAAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCTGGTGCTCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGAATGCTGTACCAGCTGCAGGGCTATTCAGAGAGACTGTAACAAAAGTTAATGGAACAACTGTTGCAGCACCAATACAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACGATTCTTCTGTGCTTCATTGTATTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTGGTTAGCATATTTCTTGGAATTTTTGTGGCAAGAAAAAACAACCCTTCAGATGGCATCACAGGATTGAGTTTGGAATCTTTTAAAGAAAATTGGAGTTCAGATTATCAGATGACGAACAGTGCTGGAATTCCTGATCCTTTAGGAAAAGTCTATTGGAATTTCAAGCTTCTTACTGCTACGGTTGCTTGGCCTTTCCCAGCACTTATTTATGTTGGAATTATTTTATCAACCCTTGGAGCTGCTCTTCAGAGTCTGACAGGAGCCCCTCGCTTACTAGCAGCCATAGCCAATGATGATATATTGCCTATTCTAAACTATTTTAAAGTAGCAGATGGCAGTGAGCCATACTTTGCAACCCTCTTTACTGCATTTCTCTGCATCGGATGTGTGATAATTGGGAATCTTGATCTTATCACACCAACTGTAACCATGTTTTTCCTACTTTGTTATGCTGGTGTGAACTTATCCTGCTTCCTTTTGGACCTACTAGACGCTCCCAGTTGGCGTCCACGCTGGAGATTCCATCATTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCGTGGTCATTCACGATAGTGTCTCTAGCCCTTGCCAGCCTTCTATATTATTATGTATGCCTTAGGGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTTCAACTTGCTCTTCGCAGTCTTCGTTCACTTGGAGCTAGCCAAGTCCACCCAAAGAATTGGTATCCCATTCCCTTGATATTTTGCCGGCCATGGGGAAAGCTGCCAGAAAATGTACCCTGTCACCCTAAACTTGCAGATTTTGCAAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTCTCCATTCTAGATGGAGATTACCATGAACGGGTTGAAGATGCAAAAGCTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGCTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCACAATGTCTGAAGGTTTCAGGGGGATCGTTCAGACGATGGGTCTCGGAAATCTCAAGCCAAATATTGTAGTGATGCGATATCCAGAAATATGGCGTCGTGAAAATCTAATAGAAATTCCGACTACTTTTGTTGGAATAATTAACGACTGCATTGATGCTAACAAAGCAGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATTTCAGAGGCAGTATGGAACTATCGACTTGTACTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGACCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATTGCAGAGGAGGATTCCGACGCGGAGGGCCTCAAAGCTGATGTCAAAAAGTTTTTATATGATCTTCGGATGCAAGCTGAGGTGATCGTTATAACGATAAAATCATGGGACACGCAAGTGGAGGGCGCGCAACCAGACGAATCAATGGAAGCCTTCACTGCTGCTCAAGGGAGGATTGCTAGTTATTTAGGTGAAATGAAGGCAGCAGCTAAGAGCAGAGGTACCACACTCATGGCTGATGGGAAGCCTGTCAGTGTGAATGAGCAGCAGGTTGGGAAGTTTCTAAATACAACTCTCAAGTTGAACTCGACAATTCTGAGATACTCGAGGATGGCTGCTGTCGTGCTCGTTAGCCTCCCGCCACCTCCTGTCGACCATCCCGCATACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAACGTGCCTCGGCTCTTGATCGTTAGAGGATACCGCAGAGACGTTTCTCAGAAATTT 2739 44.1 MDNGDIESGEEEFHGQRGRKYRPVEAHDRAVLEMSSMDPGASSSSSSVPPISLKNVKVDSQTGTETDGNSPTRIEVDGPQRESKLEFFGFDSLVNILGLKSMMGEQIQAPTSPRDGENISITQGLPKTTEVKSGTLMGVFIPCLQNILGIIYFIRFTWIVGMAGIGESLVLVSFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLNAVPAAGLFRETVTKVNGTTVAAPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVVSIFLGIFVARKNNPSDGITGLSLESFKENWSSDYQMTNSAGIPDPLGKVYWNFKLLTATVAWPFPALIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLLYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDAKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPTTFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKETFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGAQPDESMEAFTAAQGRIASYLGEMKAAAKSRGTTLMADGKPVSVNEQQVGKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVDHPAYFYMEYLDLLVENVPRLLIVRGYRRDVSQKF 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3276306 3296567 + Cp4.1LG20g05620.1 Cpe20g00557 487186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00557 913 Pfam Solute carrier family 12 583 704 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cpe20g00557 913 Pfam Solute carrier family 12 714 909 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cpe20g00557 913 Gene3D Amino acid/polyamine transporter I 345 531 - -
Cpe20g00557 913 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 13 367 - -
Cpe20g00557 913 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 365 909 - -
Cpe20g00557 913 MobiDBLite consensus disorder prediction 37 73 - -
Cpe20g00557 913 Pfam Amino acid permease 138 346 IPR004841 GO:0016020|GO:0055085
Cpe20g00557 913 Pfam Amino acid permease 375 549 IPR004841 GO:0016020|GO:0055085
Cpe20g00557 913 MobiDBLite consensus disorder prediction 8 32 - -
Cpe20g00557 913 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 13 367 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cpe20g00557 913 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 365 909 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cpe20g00557 913 MobiDBLite consensus disorder prediction 1 77 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00732 Cpe20g00557 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00557 Cpe-Chr20:3276306 Cpe09g00732 Cpe-Chr9:6726054 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00557 K14427 - csv:101216218 1039.64