Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00605 ATGGCATCCTCCACTTCACTTCTCAAGCTCATCTCAATCTTCCTCTTTCTCATCTCTTTTCTCACAACTCAAGTTGTTTCACAATCTAATCAATGTGAAACAACAACAAATTCTTGCACCAATAAAGACAAAGCAACGCGTCTTAAAATCATTGCCATTTTCTCGATCCTCATTGCGAGCGTCATCGGCGTTTGCTCCCCGCTCTTCTCTCAATCCATCCCGATGTTGCATCCTGATAGAAACACGTTCATCATCCTTAAAGCCTTTGCATCTGGCATCATTCTCGCCACCGTCAGCGGTGGCCATTTTCATGGCCACCATCACGGAGACATCAAAGAACTCAATGTTGGTTCTCAACTACTACGTTATCGAGTTATTGCCATGGTTTTGGAATTGGGGATTGTTGTCCATTCGGTTGTGATAGGACTTTCACTTGGAGCAACAAATGATACTTGCACAATCAAAGGCCTTGTGGCTGCTCTTTGTTTCCATCAAATGTTTGAAGGGATGGGTCTTGGAGGCTGTATTCTTCAGGCAGAATACAAGTGGATGAAGAAGGCAATAATGGCATTCTTTTTCTCAGTGACAACGCCATTTGGGATAGCTCTTGGAATAGGGTTGTCCAAGACATACAAAGAAAACAGCCCAGCTGCGCTCATCACTGTCGGGTTGCTGAATGCTTCTTCAGCTGGCTTGCTCATCTACATGGCTTTGGTGGATCTTCTGTCGGCTGACTTTATGGGACCAAAGCTGCAAGGCAGCATCAAACTCCAAGTCAAATCCTATGTTGCTGTGCTCTTGGGAGCTGGTGGCATGTCCTTAATGGCTAAGTGGGCT 837 45.28 MASSTSLLKLISIFLFLISFLTTQVVSQSNQCETTTNSCTNKDKATRLKIIAIFSILIASVIGVCSPLFSQSIPMLHPDRNTFIILKAFASGIILATVSGGHFHGHHHGDIKELNVGSQLLRYRVIAMVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKWMKKAIMAFFFSVTTPFGIALGIGLSKTYKENSPAALITVGLLNASSAGLLIYMALVDLLSADFMGPKLQGSIKLQVKSYVAVLLGAGGMSLMAKWA 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3697180 3699598 - Cp4.1LG20g06110.1 Cpe20g00605 487234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00605 279 Pfam ZIP Zinc transporter 104 276 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe20g00605 279 PANTHER ZINC TRANSPORTER 10-RELATED 101 279 - -
Cpe20g00605 279 TIGRFAM zip: ZIP zinc/iron transport family 102 279 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cpe20g00605 279 PANTHER ZINC TRANSPORTER 10-RELATED 14 97 - -
Cpe20g00605 279 PANTHER ZINC/IRON TRANSPORTER 101 279 - -
Cpe20g00605 279 PANTHER ZINC/IRON TRANSPORTER 14 97 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00605 Cpe-Chr20:3697180 Cpe06g00552 Cpe-Chr6:3318109 3.95E-11 dispersed
Cpe20g00605 Cpe-Chr20:3697180 Cpe09g00693 Cpe-Chr9:6137273 2.90E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00605 K14709 - csv:101221552 341.658