Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00626 ATGGCTCTGTGGGTCTTCATCTTGATGATTTTCTTGTTGATCTTTGGTTTTATTCCTGTTTCTCCTGCTCTTACTGATGATTCTGATGTTCAAGCTTTGCAAGTTATATACACTTCATTGAACAGTCCTCCTCAGCTGACTGGTTGGATTGCTAGTGGTGGGGATCCATGTGCAGAGTCATGGAAGGGTGTGGCTTGTGAAGGGTCTGCTGTTGTGTCCATTGAGATTTCTGGTTTAGAGCTGAATGGAACGATGGGTTATGCGCTTTCGAGTCTTTTGTCATTGAAAGAACTTGATATAAGCGACAACCTTATTCATGACTCGATTCCTTACCAATTGCCGCCGAATCTCACGAGACTAAATATGGCGAAGAACAGCTTAAGTGGTAATCTTCCTTATTCCTTTTCCACCATGGCTTCTCTCAGTTATTTGAATATGAGCCACAATTTGCTATCTCAGGCGATAGGAGACGTTTTCACCAATCTTTCTACCCTGGGGACGTTGGATCTTTCTTTCAACAACTTTACTGGAGATCTTCCTAAATCTTTGAGCTCTTTATCCAATGTTTCTTCCCTCTTGCTGCAGAACAACCAATTGACTGGTTCTCTCAACAATCTTATCAGTTTGCCTCTGACCACTCTAAATGTAGCGAACAATAATTTCAGTGGATGGATACCTCAAGAACTGAAGTCGATCGAAAATTTCATATACGATGGAAATTCATTTGACGATAGTCCTGCACCTCCTCCCCCGCCTTTTACTCCACCGCCTCCTGGTAGATCTCGTAACAGCTCCAGACATCCCGGGTCTGGCGGTGGCACCCATACTGCCCCAAGTTCTGATACGAGCTCATCCCACTCGAACAAAGGCTTGTCAGTTTTGGTTATGGTGGGGATAATTTTGGGTGCTATAATTATTGCCCTCATTGTGTTAGTTGCTTTCGCTGTCTGCATCATGAAGAGAAAACGCAAGAACATTGGTCTAAGAGCTTCCAGTGGAAGGCTGTCATTTGGCAACAATGTGAATGCTGAGGTGGAAGAGCGTCGGGGAAAAAGCGTTGTTGCTGTTGGAGATATTAAGCCTCTTCGTACCGAGAAAATAAATCCCGAGAGGTTACAGGCGACGAATGGATCAGTGAAAAGAATGAAGTCCCCTATCACTGCTACTTCGTACACCGTGGCTGCTCTTCAAAGTGCAACGAATAGTTTTAGCCAAGAATGCATAGTTGGTGAAGGTTCTCTCGGTCGTGTTTACAAATCGGAGTTTCCAAATGGGAAGATAATGGCGATAAAGAAAATCGATAACGCAGCACTATCACTACAAGAGGAAGACAATTTTCTTGAAGCGGTTTCAAACATGTCACGATTGAGGCATACGAACATTGTGACACTAAATGGTTATTGTGCGGAATATGGTCAGCGTCTTCTAGTTTACGAGTTCATTGGAAATGGAAGTTTACACGACATGCTCCATTTTGCTGATGAAAGTAGTAAGACACTGACTTGGAATGCACGTGTACGCGTAGCACTTGGAACCGCCCGAGCTTTAGAATACTTGCATGAGGTTTGCTTGCCTTCCGTTGTACATAGAAACTTGAAAAGTGCAAACATTTTACTTGATGAAGAGCTCAATCCCCATTTGTCAGATTGTGGTTTAGCTGCTTTAACCCCGAACACAGGGCGACAGATATCTACTCAGATGGTTGGTTCATTTGGCTATAGTGCTCCGGAATTTGCCTTGTCGGGTTTGTACACGGTCAAAAGTGACGTTTATAGCTTTGGGGTCGTGATGTTGGAGCTCTTGAGTGGTCGAAAGCCGCTTGACAGTTCGAGGGCGAGATCGGAGCAATCACTTGTGAGATGGGCTACTCCCCAACTTCACGATATCGACGCCTTGGCAAAAATGGTAGACCCTACTTTGAACGGAATGTACCCTGCGAAATCTCTATCGCGCTTCGCCGACATTATTGCTCTATGTGTCCAGCCCGAGCCCGAATTCCGACCTCCAATGTCTGAAGTAGTACAAGCACTGGTACGCTTAGTGCAAAGAGCCAGTGTGGTAAAAAGGCATTCGAGTGACGAGTCGAGTTTCACGTACAAAACGCCCGAGCACGATGTAGTTGATTTGCCATTTTGA 2136 44.8 MALWVFILMIFLLIFGFIPVSPALTDDSDVQALQVIYTSLNSPPQLTGWIASGGDPCAESWKGVACEGSAVVSIEISGLELNGTMGYALSSLLSLKELDISDNLIHDSIPYQLPPNLTRLNMAKNSLSGNLPYSFSTMASLSYLNMSHNLLSQAIGDVFTNLSTLGTLDLSFNNFTGDLPKSLSSLSNVSSLLLQNNQLTGSLNNLISLPLTTLNVANNNFSGWIPQELKSIENFIYDGNSFDDSPAPPPPPFTPPPPGRSRNSSRHPGSGGGTHTAPSSDTSSSHSNKGLSVLVMVGIILGAIIIALIVLVAFAVCIMKRKRKNIGLRASSGRLSFGNNVNAEVEERRGKSVVAVGDIKPLRTEKINPERLQATNGSVKRMKSPITATSYTVAALQSATNSFSQECIVGEGSLGRVYKSEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHTNIVTLNGYCAEYGQRLLVYEFIGNGSLHDMLHFADESSKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKSANILLDEELNPHLSDCGLAALTPNTGRQISTQMVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESSFTYKTPEHDVVDLPF 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3917624 3923686 + Cp4.1LG20g06240.1 Cpe20g00626 487255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00626 711 ProSiteProfiles Protein kinase domain profile. 403 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00626 711 Pfam Protein kinase domain 405 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe20g00626 711 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 702 - -
Cpe20g00626 711 MobiDBLite consensus disorder prediction 241 286 - -
Cpe20g00626 711 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Cpe20g00626 711 MobiDBLite consensus disorder prediction 244 262 - -
Cpe20g00626 711 SUPERFAMILY Protein kinase-like (PK-like) 381 677 IPR011009 -
Cpe20g00626 711 Gene3D Phosphorylase Kinase; domain 1 364 480 - -
Cpe20g00626 711 CDD STKc_IRAK 409 680 - -
Cpe20g00626 711 Gene3D Ribonuclease Inhibitor 24 254 IPR032675 -
Cpe20g00626 711 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8-LIKE ISOFORM X1 9 702 - -
Cpe20g00626 711 SUPERFAMILY L domain-like 26 232 - -
Cpe20g00626 711 MobiDBLite consensus disorder prediction 263 286 - -
Cpe20g00626 711 Gene3D Transferase(Phosphotransferase) domain 1 481 706 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00381 Cpe-Chr3:2041342 Cpe20g00626 Cpe-Chr20:3917624 2.43E-168 dispersed
Cpe08g01391 Cpe-Chr8:10000505 Cpe20g00626 Cpe-Chr20:3917624 4.11E-177 dispersed
Cpe12g00545 Cpe-Chr12:5586848 Cpe20g00626 Cpe-Chr20:3917624 0 dispersed
Cpe13g00020 Cpe-Chr13:181595 Cpe20g00626 Cpe-Chr20:3917624 4.86E-128 dispersed
Cpe15g00790 Cpe-Chr15:7981963 Cpe20g00626 Cpe-Chr20:3917624 5.61E-15 dispersed
Cpe17g00420 Cpe-Chr17:3144363 Cpe20g00626 Cpe-Chr20:3917624 0 dispersed
Cpe17g00994 Cpe-Chr17:7541379 Cpe20g00626 Cpe-Chr20:3917624 1.42E-84 dispersed
Cpe20g00626 Cpe-Chr20:3917624 Cpe02g01752 Cpe-Chr2:14286057 3.17E-165 dispersed
Cpe02g00968 Cpe-Chr2:8570055 Cpe20g00626 Cpe-Chr20:3917624 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63092 PF00069 Pkinase 1.50E-42 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00626 - - csv:101216091 1143.26