Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe20g00666 | ATGGCAATTCTAGACGAGGAGGAGGCCATCGAGCTTGCAAAGCACCGAGAAGTGGCAGCAGTGTTGCCAAACAAAGCCAAAGAGTTACGCACAACTCATTCATGGGAGTTCATGCATTTCGAGAAGAATGAAAAAAAAGGTGTATGGCCGGAGTCCAAGAGTTTTGGAGAACAGGGCATAGCTGGAGGTGTGCCTTCGAGGTGGAAAGGAGGCTGCACGGATAAAACCCCTGATGCAGTGCCTTGTAACAAGAAATTAATCGGAGCAAAGTATTTCAATCAGGGGGTAATCGCGTACTTGAAATCCCACAATTTAACGGATCAACTCCCATTGATCGTCAACTCCACGCGCGACTACGTAGGTCATGGAACCCACACGCTATCGACGGCCGGCGGCAGCTATGTCTCCGGCGTCAGCGTATTTGGGTCCGGTATCGGAACTGCCAAGGGCGGCTCTCCCAAGGCCCGCGTCGCTGCCTATAAGGTTTGCTGGCCGTTCCTCAACAGTGGCGGCTGCTACGACGCCGACATTTTTGACGGATTTGATCAAGCCATCTACGACGGCGTCGATGTCCTTTCGCTTTCCATCGGCAGTCCACCAGAAGAATACTATGATGATACCATCGCCATTGCTTCCTTTCATGCACTGAAGAAAGGAATCCCCGTGGTGTGCTCTGCCGGCAACTCCGGCCCGAGCATGGCGACTGCTACTAATATTGCTCCGTGGATTTTGACGCTATACCCATTGATAACCGGAGCTCAGGCGAAAGCAACGACCGCCTCTGCCGACGATGCCATGCTCTGCAAGCCGAAAACTTTGGATCATTCTAAAGTGAATGGGAAGATCTTGGTTTGCTTGACAGGGGGCTCTTCGAGAATTGACAAAGGAATGCAAGCCGTCCTCGCCGGTGCTGTCGGAATGATTCTCTGCAACGATAGGTTTAGTGGATTTAAAATCATCGCTGATCTCCATGTTCTTCCAGCTTCCCATATCAGTTACAACGACGGTCAAGCTGTTTCCTCGTACATTAATTCCAGGAAAAATCCGATGGGATATTTGTTCCCACCGTCGTCCAAAGTTAATACCAAACCTTCTCCGACCATGGCGGCTTTCTCATCCAGAGGACCCAACATAGTTTCTCCGGAAATTATCAAGCCGGACGTGACAGCGCCGGGAGTGGACATAATCGCGGCATTCTCCGGCGCCGTGAGCCCAACAGGGGAGCCATTCGACAACAGAACAGTTCCATACATAACAATGTCAGGGACTTCCATGTCCTGTCCCCATGTCTCCGGCATTGTCGGCCTCCTCAAAGCTCTCCACCCCGAATGGAGCCCCGCCGCCATCAAATCCGCCATAATGACCTCTGCCACAATTAGCGACAACACAATGAACCTCATCCTCGACGGCGGCTCCCCTTTCTTCGCTCCAGCCACCCCCTTCATATATGGGTCAGGGCACATCCACCCCACTGGCGCCATCGACCCCGGCCTCGTCTACGACCTCTCCCCCAACGATTACTTAGAATTCCTCTGCGCCAGGGGCTACACGGAGAAGAATATGCGAGTATTCGCCGAGGAAAATTTCAAGTGCCCTGTTTCTGGTTCTATTTTAAACTTTAATTACCCTTCCATTGGGGTTCAGAACTTGACTGGATGTGTCACCCTTACTAGAAGGCTGAAGAATGTTGGCAGGCCGGGAGTTTATAGAGTCAGAGTTCGACGGCCGGAAGGAGTTAAGGTTTTAGTGAAGCCAAGAGTTCTGAAGTTTCGGAAGATTGGGGAGGAGAAGAGGTTTGAATTGACGATGATCGGAGCTGTGGCGGAGGGTCAAATTGGTTATGGTACGCTAATTTGGACCGACGGCAAACACTTTGTTAAGAGTCCAATTGTG | 1893 | 51.4 | MAILDEEEAIELAKHREVAAVLPNKAKELRTTHSWEFMHFEKNEKKGVWPESKSFGEQGIAGGVPSRWKGGCTDKTPDAVPCNKKLIGAKYFNQGVIAYLKSHNLTDQLPLIVNSTRDYVGHGTHTLSTAGGSYVSGVSVFGSGIGTAKGGSPKARVAAYKVCWPFLNSGGCYDADIFDGFDQAIYDGVDVLSLSIGSPPEEYYDDTIAIASFHALKKGIPVVCSAGNSGPSMATATNIAPWILTLYPLITGAQAKATTASADDAMLCKPKTLDHSKVNGKILVCLTGGSSRIDKGMQAVLAGAVGMILCNDRFSGFKIIADLHVLPASHISYNDGQAVSSYINSRKNPMGYLFPPSSKVNTKPSPTMAAFSSRGPNIVSPEIIKPDVTAPGVDIIAAFSGAVSPTGEPFDNRTVPYITMSGTSMSCPHVSGIVGLLKALHPEWSPAAIKSAIMTSATISDNTMNLILDGGSPFFAPATPFIYGSGHIHPTGAIDPGLVYDLSPNDYLEFLCARGYTEKNMRVFAEENFKCPVSGSILNFNYPSIGVQNLTGCVTLTRRLKNVGRPGVYRVRVRRPEGVKVLVKPRVLKFRKIGEEKRFELTMIGAVAEGQIGYGTLIWTDGKHFVKSPIV | 631 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 4383442 | 4386357 | - | Cp4.1LG20g06770.1 | Cpe20g00666 | 487295 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe20g00666 | 631 | Gene3D | - | 511 | 631 | - | - | |
| Cpe20g00666 | 631 | SUPERFAMILY | Subtilisin-like | 82 | 498 | IPR036852 | GO:0004252|GO:0006508 | |
| Cpe20g00666 | 631 | CDD | Peptidases_S8_3 | 27 | 458 | IPR034197 | - | |
| Cpe20g00666 | 631 | Pfam | Subtilase family | 115 | 463 | IPR000209 | GO:0006508|GO:0008236 | |
| Cpe20g00666 | 631 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 422 | 432 | IPR023828 | - | |
| Cpe20g00666 | 631 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 246 | 631 | - | - | |
| Cpe20g00666 | 631 | Pfam | Fibronectin type-III domain | 539 | 631 | IPR041469 | - | |
| Cpe20g00666 | 631 | Gene3D | Peptidase S8/S53 domain | 362 | 507 | IPR036852 | GO:0004252|GO:0006508 | |
| Cpe20g00666 | 631 | Gene3D | Peptidase S8/S53 domain | 47 | 245 | IPR036852 | GO:0004252|GO:0006508 | |
| Cpe20g00666 | 631 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 246 | 631 | IPR045051 | - | |
| Cpe20g00666 | 631 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 2 | 245 | IPR045051 | - | |
| Cpe20g00666 | 631 | SUPERFAMILY | PA domain | 275 | 363 | IPR046450 | - | |
| Cpe20g00666 | 631 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 2 | 245 | - | - | |
| Cpe20g00666 | 631 | PRINTS | Subtilisin serine protease family (S8) signature | 118 | 131 | IPR015500 | - | |
| Cpe20g00666 | 631 | PRINTS | Subtilisin serine protease family (S8) signature | 421 | 437 | IPR015500 | - | |
| Cpe20g00666 | 631 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 494 | - | - | |
| Cpe20g00666 | 631 | Pfam | PA domain | 264 | 338 | IPR003137 | - | |
| Cpe20g00666 | 631 | Gene3D | - | 246 | 361 | - | - | |
| Cpe20g00666 | 631 | CDD | PA_subtilisin_like | 244 | 353 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe20g00666 | Cpe-Chr20:4383442 | Cpe20g00670 | Cpe-Chr20:4474928 | 0 | dispersed | |
| Cpe20g00666 | Cpe-Chr20:4383442 | Cpe20g00667 | Cpe-Chr20:4401282 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe20g00666 | - | - | cmos:111434037 | 1120.15 |