Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00668 TCCTATATTGTGTTATTAGGATCTCATTCACATGGGTTAGAGGTATCAGCCGTAGATCTTCAAAAAGTGGTCGATTCCCATCACAAATTGCTCGGATCCTTCTTGGGGAGTTCTAAGAAGGCAAAAGATGCAATTTTTTACTCGTATAAGAACCACATAAATGGGTTTGCAGCCATTCTAGATGAGGAGGAGGCCACCAAACTTGCAAAGCACCGAGAAGTAGCAGCAGTGTTGCCAAACAAAGCTAAAGAGTTACACACAACTCATTCATGGGAGTTCATGCATTTGGAGAAGAATGGTGTTATTCCCTCTTCTTCTCCTTGGAGGAAGGCTAGATTTGGAGAAGATGTTATTATCGCCAATCTTGACTCAGGTGTATGGCCGGAGTCCAAGAGTTTTGGAGAACAAGGCATAGTTGGAGGTGTGCCATCGAGGTGGAAAGGAGGCTGCACGGATAAAACCCCTGATGCAGTGCCTTGCAACCGGAAATTAATCGGAGCAAAGTATTTCAACCAGGGGGTACTCGCGTACTTGAAATCCCAAAATTTAATGGATGAACTCCCATTGATCGTCAACTCCACGCGTGACTACAAAGGTCATGGATCCCACACGCTGTCGACGGCTGGCGGCAGTTATGTCTCCAACGTTAGCGTATTTGGGTCCGGTATCGGAACTGCCAAGGGCGGCTCTCCCAAGGCCCGCGTCGCTGCCTATAAGGTCTGCTGGCCGCTTCCTAACATTGGTGGCTGCTTTGACGCCGACGTTGCCGAGGCATTTGATCATGCCATCCACGACGGCGTAGATTCCACCAGCCCANACGGCGTCGATGTCCTTTCGCTTTCCATCGGCAGTCCACCAGCCCAATACTATGATGATATCATTGCCATTGGTTCCTTTCATGCACTAAAGAAAGGAATCCCCGTTGTGTGCTCTGCTGGAAACTCCGGCCCGAACATGGCGACTGCTTCTAATATTGCTCCGTGGATTTTGACAGGGTCGAGCCTTTCGAATCCATTAGCGGGAAGAAAGCTATACCCATTGATAACGGGAGCTCAGGCGAAAGCGACGACTGCCTTTGCCCAGGACGCCATTCTCTGCAAGCCGGAAACGTTGGATCATTCTAAAGTGAAAGGGAAGATCTTGGTTTGCTTGAGAGGGGGTTCTTCGAGAATTAACAAAGGAATGCAAGCCCTCCTCGCCGGTGCTGTCGGAATGATTCTCTGCAATGATAGGCTTAGTGGATTTCAAATCATGGCCGATCTCCATGTTCTTCCAACTTCCCATATCAATTACAATGACGGCCAAGCTGTTTTCTCGTACATCTATTTCACAAAAAATCCGATGGGATATTTGATCCCGCCGTCGTCTAAAGTTAATACCAAACCTTCTCCGACAATGGCGGCTTTCTCCTCGAGAGGACCCAACATCGTTTCACCTGAAATTATCAAGCCGGACGTGACAGCGCCGGGAGTGAACATAATCGCGGCATTCTCCGGCGCCGTGAGCCCAACAGGGGAGCCATTCGACAACAGAGCAGTTCCATACATAACAATGTCGGGGACCTCCATGTCCTGTCCCCATGTCTCTGGCATTGTCGGCCTCCTCAAAGCTCTCCACCCCGAATGGAGCCCTGCTGCCATCAAATCTGCCATAATGACCTCCGCCAGAGTTAGCGACAACACAATGAACCTCATGCTCGACGGCGGCTCCCCTATCTTTGCTCCAGCCACCCCGTTCATATATGGGTCAGGGCACATCCGCCCCACTGGCGCCATGGACCCCGGCCTTGTCTACGACCTTTCCCCCAACGATTACTTGGAATTCCTCTGCGCCAGCGGCTACAAGGAGAAGAACCTTCGAGTATTCGCCGAATTTGAGAAGATTGGAGAGGAGAAGGGGTTTGAATTGACGATGACAGGAGCTTATGAATTA 1932 50.1 SYIVLLGSHSHGLEVSAVDLQKVVDSHHKLLGSFLGSSKKAKDAIFYSYKNHINGFAAILDEEEATKLAKHREVAAVLPNKAKELHTTHSWEFMHLEKNGVIPSSSPWRKARFGEDVIIANLDSGVWPESKSFGEQGIVGGVPSRWKGGCTDKTPDAVPCNRKLIGAKYFNQGVLAYLKSQNLMDELPLIVNSTRDYKGHGSHTLSTAGGSYVSNVSVFGSGIGTAKGGSPKARVAAYKVCWPLPNIGGCFDADVAEAFDHAIHDGVDSTSPXGVDVLSLSIGSPPAQYYDDIIAIGSFHALKKGIPVVCSAGNSGPNMATASNIAPWILTGSSLSNPLAGRKLYPLITGAQAKATTAFAQDAILCKPETLDHSKVKGKILVCLRGGSSRINKGMQALLAGAVGMILCNDRLSGFQIMADLHVLPTSHINYNDGQAVFSYIYFTKNPMGYLIPPSSKVNTKPSPTMAAFSSRGPNIVSPEIIKPDVTAPGVNIIAAFSGAVSPTGEPFDNRAVPYITMSGTSMSCPHVSGIVGLLKALHPEWSPAAIKSAIMTSARVSDNTMNLMLDGGSPIFAPATPFIYGSGHIRPTGAMDPGLVYDLSPNDYLEFLCASGYKEKNLRVFAEFEKIGEEKGFELTMTGAYEL 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4427811 4430473 - Cp4.1LG20g06760.1 Cpe20g00668 487297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00668 644 Gene3D - 340 459 - -
Cpe20g00668 644 Pfam PA domain 364 436 IPR003137 -
Cpe20g00668 644 Gene3D Peptidase S8/S53 domain 460 605 IPR036852 GO:0004252|GO:0006508
Cpe20g00668 644 Gene3D Peptidase S8/S53 domain 116 331 IPR036852 GO:0004252|GO:0006508
Cpe20g00668 644 PRINTS Subtilisin serine protease family (S8) signature 114 133 IPR015500 -
Cpe20g00668 644 PRINTS Subtilisin serine protease family (S8) signature 519 535 IPR015500 -
Cpe20g00668 644 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Cpe20g00668 644 CDD PA_subtilisin_like 330 451 - -
Cpe20g00668 644 Pfam Peptidase inhibitor I9 1 85 IPR010259 -
Cpe20g00668 644 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 86 IPR037045 -
Cpe20g00668 644 SUPERFAMILY PA domain 373 439 IPR046450 -
Cpe20g00668 644 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 1 628 - -
Cpe20g00668 644 CDD Peptidases_S8_3 83 555 IPR034197 -
Cpe20g00668 644 SUPERFAMILY Subtilisin-like 85 596 IPR036852 GO:0004252|GO:0006508
Cpe20g00668 644 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 628 IPR045051 -
Cpe20g00668 644 ProSiteProfiles Serine proteases, subtilase domain profile. 90 592 - -
Cpe20g00668 644 Pfam Subtilase family 115 563 IPR000209 GO:0006508|GO:0008236
Cpe20g00668 644 ProSitePatterns Serine proteases, subtilase family, serine active site. 520 530 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00668 Cpe-Chr20:4427811 Cpe20g00670 Cpe-Chr20:4474928 0 dispersed
Cpe20g00667 Cpe-Chr20:4401282 Cpe20g00668 Cpe-Chr20:4427811 3.69E-148 tandem
Cpe20g00668 Cpe-Chr20:4427811 Cpe20g00669 Cpe-Chr20:4459739 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00668 - - cmos:111434037 1097.42