Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe20g00669 | ATGGATAAAGGAATCCCCGTTGTGTGCTCTGCTGGAAACTCCGGCCCGAACATGGCGACTGCTTCTAATATTGCTCCGTGGATTTTGACAGCGAAAGCGACGACTGCCTTTGCCCAGGACGCCATTCTCTGCAAGCCGGAAACGTTGGATCATTCTAAAGTGAAAGGGAAGATCTTGGTTTGCTTGAGAGGGGGTTCTTCGAGAATTAACAAAGGAATGCAAGCCCTCCTCGCCGGTGCTGTCGGAATGATTCTCTGCAATGATAGGCTTAGTGGATTTCAAATCATGGCCGATCTCCATGTTCTTCCAACTTCCCATATCAATTACAATGACGGCCAAGCTGTTTTCTCGTACATCTATTTCACAAAAAATCCGATGGGATATTTGATCCCGCCGTCGTCTAAAGTTAATACCAAACCTTCTCCGACAATGGCGGCTTTCTCCTCGAGAGGACCCAACATCGTTTCACCTGAAATTATCAAGCCGGACGTGACAGCGCCGGGAGTGAACATAATCGCGGCATTCTCCGGCGCCGTGAGCCCAACAGGGGAGCCATTCGACAACAGAGCAGTTCCATACATAACAATGTCGGGGACCTCCATGTCCTGTCCCCATGTCTCTGGCATTGTCGGCCTCCTCAAAGCTCTCCACCCCGAATGGAGCCCTGCTGCCATCAAATCTGCCATAATGACCTCCGCCAGAGTTAGCGACAACACAATGAACCTCATGCTCGACGGCGGCTCCCCTATCTTTGCTCCAGCCACCCCGTTCATATATGGGTCAGGGCACATCCGCCCCACTGGCGCCATGGACCCCGGCCTTGTCTACGACCTTTCCCCCAACGATTACTTGGAATTCCTCTGCGCCAGCGGCTACAAGGAGAAGAACCTTCGAGTATTCGCCGATGGCAATTTCAAATGCCCTGTTTCTGGTTCTATTTTGAACTTTAATTACCCTTCTATTGGGGTTCAGAACTTAATTGGGAGTGTCACGGTTTCTAGAAGGCTGAAGAATGTTGGCATGCCGGGGGTTTACAGAGTTAGAGTCGAGCGGCCGGAAGGAGTTCAGGTTTCAGTGAATCCAAGCGTTTTGAAGTTTGAGAAGATTGGAGAGGAGAAGGGGTTTGAATTGACGATAACAGGAGTTGTGGCGGAGGGTCAAATTAGTTTCGGTACGTTGATTTGGACGGACGACAAGCACTTTGTTAGGAGCCCAATTGTTGTTTCTTCAGGCTTTTTCTGA | 1242 | 50.16 | MDKGIPVVCSAGNSGPNMATASNIAPWILTAKATTAFAQDAILCKPETLDHSKVKGKILVCLRGGSSRINKGMQALLAGAVGMILCNDRLSGFQIMADLHVLPTSHINYNDGQAVFSYIYFTKNPMGYLIPPSSKVNTKPSPTMAAFSSRGPNIVSPEIIKPDVTAPGVNIIAAFSGAVSPTGEPFDNRAVPYITMSGTSMSCPHVSGIVGLLKALHPEWSPAAIKSAIMTSARVSDNTMNLMLDGGSPIFAPATPFIYGSGHIRPTGAMDPGLVYDLSPNDYLEFLCASGYKEKNLRVFADGNFKCPVSGSILNFNYPSIGVQNLIGSVTVSRRLKNVGMPGVYRVRVERPEGVQVSVNPSVLKFEKIGEEKGFELTITGVVAEGQISFGTLIWTDDKHFVRSPIVVSSGFF | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 4459739 | 4473835 | - | Cp4.1LG20g06750.1 | Cpe20g00669 | 487298 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe20g00669 | 413 | CDD | PA_subtilisin_like | 43 | 129 | - | - | |
Cpe20g00669 | 413 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 270 | - | - | |
Cpe20g00669 | 413 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 2 | 35 | - | - | |
Cpe20g00669 | 413 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 198 | 208 | IPR023828 | - | |
Cpe20g00669 | 413 | PANTHER | PEPTIDASE S8 | 2 | 35 | - | - | |
Cpe20g00669 | 413 | PANTHER | PEPTIDASE S8 | 62 | 409 | - | - | |
Cpe20g00669 | 413 | Gene3D | Peptidase S8/S53 domain | 1 | 35 | IPR036852 | GO:0004252|GO:0006508 | |
Cpe20g00669 | 413 | Gene3D | Peptidase S8/S53 domain | 138 | 283 | IPR036852 | GO:0004252|GO:0006508 | |
Cpe20g00669 | 413 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 62 | 409 | - | - | |
Cpe20g00669 | 413 | SUPERFAMILY | PA domain | 51 | 117 | IPR046450 | - | |
Cpe20g00669 | 413 | Pfam | Subtilase family | 2 | 241 | IPR000209 | GO:0006508|GO:0008236 | |
Cpe20g00669 | 413 | Pfam | Fibronectin type-III domain | 315 | 408 | IPR041469 | - | |
Cpe20g00669 | 413 | Gene3D | - | 287 | 411 | - | - | |
Cpe20g00669 | 413 | Pfam | PA domain | 44 | 114 | IPR003137 | - | |
Cpe20g00669 | 413 | Gene3D | - | 37 | 137 | - | - | |
Cpe20g00669 | 413 | SUPERFAMILY | Subtilisin-like | 2 | 271 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe20g00669 | Cpe-Chr20:4459739 | Cpe15g00670 | Cpe-Chr15:7318749 | 5.12E-139 | dispersed | |
Cpe20g00668 | Cpe-Chr20:4427811 | Cpe20g00669 | Cpe-Chr20:4459739 | 0 | tandem | |
Cpe20g00669 | Cpe-Chr20:4459739 | Cpe20g00670 | Cpe-Chr20:4474928 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe20g00669 | - | - | cpep:111783570 | 800.045 |