Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00670 ATGAACTTTCCCACTTTTGTTCTTATTTTGTTCGGGTTCTTTTGGTTAATATCACCTGCGATTGCTATCAAAAAGTCCTATATTGTGTTATTAGGATCTCATGCACATGGTTTAGAAGTTTCAGCCGTAGATCTTCAAAGAGCGGTCGATTCCCATCACAAATTGCTCGGATCCTTCTTGGGGAGTTCTGGGAAGGCAAAAGATGCCATTTTTTACTCTTACAAGAACCATATAAATGGGTTTGCAGCCATTCTAGATGAGGAGGAGGCCACCAAGCTTGCAAAGCACCCGGAAGTAGCAGCAGTGTTGCCAAACAAAGCGAAAGAATTACACACAACTCGTTCATGGGAGTTCATGCACTTGGAGAAGAATGGTGTTAGTCCCCCTTCTTCTCCTTGGAGGAAGGCTAAATCAGGACGAAATGTTATTATCGCCAATCTTGACACTGGTGTATGGCCGGAGTCCAAGAGTTTTGGAGAACATGGCATAGTTGGAGGTGTGCCATCGAGGTGGAAAGGAGGCTGCACGGATAAAACCCCTGATGCAGTGCCTTGTAACCGAAAATTAATCGGAGCAAAATATTTCAATCACGGGGTAATTGCGTACTTGAAATCTGAAAATTTAACGAAAGAACTCTCATTCATCGTCAACTCCACGCGCGACTACGAAGGTCATGGATCCCACACGCTGTCGACGGCCGGTGGTAGCTATGTCTCCGGCGTTAGTGTATTTGGGTCCGGTATCGGAACTGCCAAGGGCGGCTCTCCCAAGGCCCACGTCGCTGCCTATAAGGTCTGCTGGCCGCTCCACGACACTGGTGGCTGCTTTGACGCCGACATTGCCAAGGCATTTGATCATGCCATCCACGATGGCGTCGACGTCCTTTCGCTTTCCCTCGGCAGTCCACCTGCTGAATACTATGATGATATCATTGCCATTGCTTCCTTTCATGCACTGAAGAAAGGAATCCCTGTTGTGTGCTCCGCCGGCAACGATGGCCCGAGCATGGCGACTGTTTCTAATACTGCTCCGTGGATTTTGACGGTCGGAGCTAGCACTTTGGACCGTGAATTTCAAGCCCCCATTGAGCTTAGAAATGGGAAACACTTCAAGGGGTCGAGCCTTTCGGGACCATTATCGGGAAGAAAGCTATACCCATTGATAACCGGAGCTCAGGCAAAAGCGACGACCGCCTCTACTGACGATGCCATGCTCTGCAAGCCGAAAACTTTGGATCATTCTAAAGTGAAAGGGAAGATCTTGGTTTGCTTGAGAGGGGATTCTTCGAGAGTTGACAAAGGAGTGCAAGCCCTCCTCGCTGGTGCTGTCGGAATGATTCTCTGCAACGATAGGCTTAGTGGATTTGAGATCATCGCCGATCCCCATGTTCTTCCAGCTTCCCATATCAGTTACAACGACGGCCAAGTTGTTTCCTCGTACATCAATTCCACGAAAAATCCAATGGGGCATTTGATCCCGCCGTTGTCTAAAGTTAATACCAAACCTTCTCCGACAATGGCGGCTTTCTCATCTAGAGGACCCAACATGGTTTCACCGGAAATTATCAAGCCGGATGTGACAGCGCCGGGAGTGAACATAATTGCGGCATTCTCCGGCGCCGTGAGCCCAACAGGGGAGCCATTTGACAATAGAACAGTTCCATACATAACAATGTCAGGGACCTCGATGTCCTGTCCCCATGTCTCTGGCATTGTCGGCCTCCTTAAAGCTCTCCACCCGAAATGGAGCCCTGCCGCCATCAAATCCGCCATAATGACCTCCGCCAGAATTCGTGACAACACAATGAACATCATGCTCGACGGCGGCTCCCCTATCTTCGCTCCAGCCACCCCCTTCATATTTGGGTCAGGGCACATTCGCCCCACTGGAGCCATCGACCCCGGCCTTGTCTACGACCTTTCCCCCAATGATTACTTGGAATTCCTCTGCGCTAGTGGCTACAAGGAGAAGAACCTTCGAGTATTCGCTGATGGCAATTTCAAATGCCCTATTTCTAGTTCTATTTTGAACTTTAATTACCCTTCAATTGGGGTTCAGAACTTGACGGGCAATGTCACCCTTACTAGAAGGTTGAAGAATGTTGGCAGGCCGGGGGTTTACAGAGTCAGGGTTCAGCAGCCGGAAGGAGTTAAGGTTTCGGTGAAGCCAAGCGTTTTGAAGTTTAAGAAGATTGGAGAGGAGAAGAGGTTTGAATTGACCATGATCGGAGCTATGGCGAATAGTCAAATTGGTTACGGCACGCTGATTTGGACCGACGGCAAGCACTTTGTTAGGAGTCCAATTGTAGTTTCTTCCGGCTTTTTCTGA 2328 49.01 MNFPTFVLILFGFFWLISPAIAIKKSYIVLLGSHAHGLEVSAVDLQRAVDSHHKLLGSFLGSSGKAKDAIFYSYKNHINGFAAILDEEEATKLAKHPEVAAVLPNKAKELHTTRSWEFMHLEKNGVSPPSSPWRKAKSGRNVIIANLDTGVWPESKSFGEHGIVGGVPSRWKGGCTDKTPDAVPCNRKLIGAKYFNHGVIAYLKSENLTKELSFIVNSTRDYEGHGSHTLSTAGGSYVSGVSVFGSGIGTAKGGSPKAHVAAYKVCWPLHDTGGCFDADIAKAFDHAIHDGVDVLSLSLGSPPAEYYDDIIAIASFHALKKGIPVVCSAGNDGPSMATVSNTAPWILTVGASTLDREFQAPIELRNGKHFKGSSLSGPLSGRKLYPLITGAQAKATTASTDDAMLCKPKTLDHSKVKGKILVCLRGDSSRVDKGVQALLAGAVGMILCNDRLSGFEIIADPHVLPASHISYNDGQVVSSYINSTKNPMGHLIPPLSKVNTKPSPTMAAFSSRGPNMVSPEIIKPDVTAPGVNIIAAFSGAVSPTGEPFDNRTVPYITMSGTSMSCPHVSGIVGLLKALHPKWSPAAIKSAIMTSARIRDNTMNIMLDGGSPIFAPATPFIFGSGHIRPTGAIDPGLVYDLSPNDYLEFLCASGYKEKNLRVFADGNFKCPISSSILNFNYPSIGVQNLTGNVTLTRRLKNVGRPGVYRVRVQQPEGVKVSVKPSVLKFKKIGEEKRFELTMIGAMANSQIGYGTLIWTDGKHFVRSPIVVSSGFF 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4474928 4478506 - Cp4.1LG20g06740.1 Cpe20g00670 487299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00670 775 Gene3D - 649 773 - -
Cpe20g00670 775 SUPERFAMILY Protease propeptides/inhibitors 25 105 - -
Cpe20g00670 775 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cpe20g00670 775 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Cpe20g00670 775 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Cpe20g00670 775 PANTHER PEPTIDASE S8 17 772 - -
Cpe20g00670 775 SUPERFAMILY Subtilisin-like 110 636 IPR036852 GO:0004252|GO:0006508
Cpe20g00670 775 CDD PA_subtilisin_like 362 489 - -
Cpe20g00670 775 Gene3D - 355 499 - -
Cpe20g00670 775 Pfam Peptidase inhibitor I9 26 110 IPR010259 -
Cpe20g00670 775 Pfam Subtilase family 139 598 IPR000209 GO:0006508|GO:0008236
Cpe20g00670 775 Pfam PA domain 403 475 IPR003137 -
Cpe20g00670 775 Pfam Fibronectin type-III domain 677 770 IPR041469 -
Cpe20g00670 775 Gene3D Peptidase S8/S53 domain 141 645 IPR036852 GO:0004252|GO:0006508
Cpe20g00670 775 CDD Peptidases_S8_3 108 595 IPR034197 -
Cpe20g00670 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Cpe20g00670 775 SUPERFAMILY PA domain 413 485 IPR046450 -
Cpe20g00670 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Cpe20g00670 775 PANTHER BNAC02G33520D PROTEIN 17 772 - -
Cpe20g00670 775 ProSiteProfiles Serine proteases, subtilase domain profile. 115 632 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00666 Cpe-Chr20:4383442 Cpe20g00670 Cpe-Chr20:4474928 0 dispersed
Cpe20g00667 Cpe-Chr20:4401282 Cpe20g00670 Cpe-Chr20:4474928 0 dispersed
Cpe20g00668 Cpe-Chr20:4427811 Cpe20g00670 Cpe-Chr20:4474928 0 dispersed
Cpe20g00670 Cpe-Chr20:4474928 Cpe14g00822 Cpe-Chr14:6607006 0 dispersed
Cpe20g00669 Cpe-Chr20:4459739 Cpe20g00670 Cpe-Chr20:4474928 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00670 - - cmos:111434037 1332.01