Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00722 ATGGGTCAGATCCAGTACTCTGAGAAATACTTTGATGATATCTATGAGTACAGGCATGTCGTGCTTACTCCTGATGTGGCGAAACTTCTGCCCAAGAATCGCCTTCTTTCTGAGAATGAATGGCGAGCGATTGGGGTTCAGCAGAGCCGTGGATGGGTGCATTATGCAATTCACCGCCCAGAGCCGCACATAATGCTGTTCAGGAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCTCAGCAGCAGATTCTGGCGAAGTGA 267 49.06 MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK 88
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 6140620 6142239 + Cp4.1LG20g07420.1 Cpe20g00722 487351
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00722 88 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Cpe20g00722 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 86 - -
Cpe20g00722 88 SUPERFAMILY Cell cycle regulatory proteins 1 83 IPR036858 GO:0016538
Cpe20g00722 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 86 - -
Cpe20g00722 88 Gene3D - 1 84 IPR036858 GO:0016538
Cpe20g00722 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Cpe20g00722 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Cpe20g00722 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Cpe20g00722 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Cpe20g00722 88 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Cpe20g00722 88 SMART CKS_2 3 72 IPR000789 GO:0016538
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe16g00498 Cpe20g00722 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00498 Cpe-Chr16:6045725 Cpe20g00722 Cpe-Chr20:6140620 3.45E-50 wgd
Cpe20g00722 Cpe-Chr20:6140620 Cpe05g00396 Cpe-Chr5:2243788 4.19E-51 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00722 K02219 - csv:101204120 159.458