Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00750 ATGAGCGGCGGCGTGGAGGGGTCTCCGGGGAGCTCGATGCATGGGGTGACAGGGAGAGAGCAGACGTTTGCATTCTCGGTGGCATCCCCAATTGTCCCAACAGACACAACAGCTAAGTTTGCATTACCAGTGGACTCTGAGCACAAGGCGAAGGTGTTCAAGCTCTTCTCCTTCGCCAACCCCCACATGAGAACCTTCCACCTTTCTTGGATTTCCTTCTTCACTTGCTTCGTCTCCACCTTCGCCGCCGCCCCTCTTGTCCCCATCATCCGTGATAACCTCAACCTCACCAAAGTCGACATTGGCAACGCCGGCGTCACCTCCGTCTCCGGCAGCATCTTCTCTCGTCTTGTCATGGGCGCCGTCTGCGACCTTCTCGGCCCTCGCTACGGCTGCGCCTTTCTCATCATGCTCTCCGCCCCCACCGTCTTCTGCATGTCCTTCGTCTCCGACGCCGCCGGCTACATCGCCGTCCGCTTCATGATCGGCTTCTCCCTCGCCACCTTCGTCTCCTGCCAGTACTGGATGAGCACCATGTTCAACAGCCAGATCATCGGCCTCGTCAACGGCACCGCCGCCGGATGGGGCAACATGGGCGGAGGAGCCACCCAGCTCATCATGCCCTTGCTCTATGACATCATCAAGAGAGCCGGCGCTACTCCCTTCACTGCCTGGCGGATTGCCTTCTTCATCCCTGGGTGGCTTCATGTCATCATGGGCATCTTGGTTCTCACTCTCGGCCAGGACTTGCCCGATGGCAACCTTAGCAGCCTTCAGAAGAAGGGTGACGTTGCCAAAGATAAATTCTCCAAGGTCCTCTGGTACGCCATCACCAACTATCGAACTTGGATCTTCGTCCTCCTCTACGGCTACTCCATGGGCGTCGAGCTCTCCACCGACAACGTCATTGCCGAGTATTTCTACGACAGGTTTGATCTAAAGCTGCACACCGCCGGGATCATCGCAGCCACGTTCGGAATGGCGAATCTGGTGGCTCGGCCGTTCGGAGGGTATGCGTCGGACTTTGCGGCGCGATACTTCGGGATGAGGGGAAGGCTGTGGACTCTATGGATCCTGCAGACATTCGGGGGAGTGTTCTGCATGTGGCTTGGGAAGGCGGACAAGCTGCCAACAGCCATAGCGGCAATGATATTGTTCTCAATAGGAGCACAGGCTGCGTGTGGAGCCACATTTGGGATCATTCCCTTCATTTCTAGGCGGTCTCTAGGGATCATATCAGGGCTGACAGGAGCAGGAGGGAACTTTGGGTCTGGTTTGACTCAGTTGGTGTTCTTCTCAACCACCAAATACACCACAGACAAAGGGCTGTTCTTGATGGGGATAATGATTGTGTGTTGCACTCTTCCAGTCACTTTGGTTCACTTCCCTCAGTGGGGAAGCATGTTCTTACCCCCAACCAAACACGTTGAGAAGTCCACTGAGGAATTCTATTACGGCGCTGAATGGACTGAGGATGAAAAGAAGAAGGGTTTGCACCAACAAAGCATCAAGTTCGCTGAGAACAGCCGCTCCGAACGTGGAAGGCGCGTTGGCTCAGCCCCAACCCCACCAAACACCACTCCTTCCCATGTTTGA 1596 55.76 MSGGVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVTSVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLIMPLLYDIIKRAGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLSSLQKKGDVAKDKFSKVLWYAITNYRTWIFVLLYGYSMGVELSTDNVIAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDFAARYFGMRGRLWTLWILQTFGGVFCMWLGKADKLPTAIAAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTTKYTTDKGLFLMGIMIVCCTLPVTLVHFPQWGSMFLPPTKHVEKSTEEFYYGAEWTEDEKKKGLHQQSIKFAENSRSERGRRVGSAPTPPNTTPSHV 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6518091 6519794 + Cp4.1LG20g07110.1 Cpe20g00750 487379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00750 531 SUPERFAMILY MFS general substrate transporter 60 463 IPR036259 -
Cpe20g00750 531 Gene3D MFS general substrate transporter like domains 265 467 IPR036259 -
Cpe20g00750 531 Pfam Major Facilitator Superfamily 70 426 IPR011701 GO:0022857|GO:0055085
Cpe20g00750 531 Gene3D MFS general substrate transporter like domains 58 255 IPR036259 -
Cpe20g00750 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 5 528 IPR044772 GO:0015112
Cpe20g00750 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 5 528 - -
Cpe20g00750 531 MobiDBLite consensus disorder prediction 493 531 - -
Cpe20g00750 531 CDD MFS_NRT2_like 66 459 IPR044772 GO:0015112
Cpe20g00750 531 MobiDBLite consensus disorder prediction 493 514 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01549 Cpe-Chr1:9243081 Cpe20g00750 Cpe-Chr20:6518091 8.04E-179 dispersed
Cpe20g00750 Cpe-Chr20:6518091 Cpe20g00751 Cpe-Chr20:6529730 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00750 K02575 - csv:101218244 1036.94