Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00765 ATGATTATCCTCGGTAGTCCATCCATGGCGGCCGCAGGCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTGGCCGTCGTCTGCTTCATCTTACTCTTCATCTCCATCATCATCGAATATATAATCCACCTTATCGGACAGTGGCTGAAGAAGAGACACAAACGAGCTTTATTTGAAGCTCTTGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCGCTGCTTTTAACGGTCGGGCAAGGTCCGATCTCTGACATATGTATTCCTGAACACGTGGCTGCCACGTGGCATCCTTGTACAAAGGAGAAAGAAGCGAAGATGAATGAAGATATGGAGAAATCCGTGGAACATTTGGCTAATAATGGCCGGAGACTTCTCCATCTGAACGGAACTGGTGGAAGTTTCAGGCGGGTTTTGGCCGCGCCTGGTGGAGCCGACAAGTGTGCTGCTAAGGGTTTAGTGTCGTTTATTTCAGCGGAAGGAATTCATCAACTTCATATCTTCATATTCGTGTTGGCTGTTTGCCATGTTTTGTATTGTGTTCTAACTTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACATGGGAAAAAGAAACCAAAACGGCGGAATATCAGTTCTCACACGGTACGATCTCTGATATATTCAAAACTGGGTTTGTAGATTTTAACAAATTGTCGAAAAGATTTATTAAACATAACAAAATTATGGCAGATCCCGAGAGATTTAGGTTTGCAAGAGACACCTCGTTCGGGAGAAGACATTTAAACTTCTGGACGAAGAATTCTACCCTAATGTGGATAGCACATTTAGCTCCTCAAAGTCATACACAATTCGATTTCCAAAAGTTGGAGGGCATATCTATGGCTGCCATTCATCCCATTAATCATTCTGCTGCTGATCGGGACGAAGTTGCAGGTGATCATAACGAAGATGGCGCTGAGAATACAAGAGCGAGGCGAAGTGGTGAAGGGCGTGCCGAGGATGTGGTGATCAGAATCTCGATGGGGGTGATTGTACAAATCCTTTGTAGTTATGTAACTCTACCTCTTTATGCATTGGTAACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAATGAGAGAGTGGCAGCTGCCCTTAGAAATTGGTACCACACGGCTCGAAAGCACATCAAACACAACCGTGGTTTGATCACCCCAATGTCGAGTCGACCCACCACTCCGACTCACCACATGTCACCCGTTCACCTTCTTCGACATTACAAGAGTGAGGTCGATAGCTTCCATAACTCGCCGAGAAGGTCACCGTTTGAACCAGATCGTTGGGACAATGATTCACCGTCCCCTTCTCGTCATGCTGATGGTTCGTCCTCGTCACAACCCCACGTTGAGATGGGAAGCTATGATAAAGATCCAATTGAATCAGGTTTGACTGAAGTTAACCCTGTTCGACCGTCTCGAACGCGCACTCAACATGAGATTGATATTGGTCATAAAGACTTTTCGTTTGATAGAATTGAATGA 1524 45.34 MIILGSPSMAAAGGGKSLEQTPTWAVAVVCFILLFISIIIEYIIHLIGQWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPISDICIPEHVAATWHPCTKEKEAKMNEDMEKSVEHLANNGRRLLHLNGTGGSFRRVLAAPGGADKCAAKGLVSFISAEGIHQLHIFIFVLAVCHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHGTISDIFKTGFVDFNKLSKRFIKHNKIMADPERFRFARDTSFGRRHLNFWTKNSTLMWIAHLAPQSHTQFDFQKLEGISMAAIHPINHSAADRDEVAGDHNEDGAENTRARRSGEGRAEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHTARKHIKHNRGLITPMSSRPTTPTHHMSPVHLLRHYKSEVDSFHNSPRRSPFEPDRWDNDSPSPSRHADGSSSSQPHVEMGSYDKDPIESGLTEVNPVRPSRTRTQHEIDIGHKDFSFDRIE 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6806745 6812431 + Cp4.1LG20g09140.1 Cpe20g00765 487394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00765 507 MobiDBLite consensus disorder prediction 486 507 - -
Cpe20g00765 507 MobiDBLite consensus disorder prediction 427 448 - -
Cpe20g00765 507 PANTHER MLO-LIKE PROTEIN 1 240 273 IPR004326 GO:0006952|GO:0016021
Cpe20g00765 507 MobiDBLite consensus disorder prediction 304 331 - -
Cpe20g00765 507 MobiDBLite consensus disorder prediction 427 507 - -
Cpe20g00765 507 MobiDBLite consensus disorder prediction 449 464 - -
Cpe20g00765 507 PANTHER MLO-LIKE PROTEIN 240 273 - -
Cpe20g00765 507 Pfam Mlo family 332 421 IPR004326 GO:0006952|GO:0016021
Cpe20g00765 507 Pfam Mlo family 16 278 IPR004326 GO:0006952|GO:0016021
Cpe20g00765 507 PANTHER MLO-LIKE PROTEIN 1 10 215 IPR004326 GO:0006952|GO:0016021
Cpe20g00765 507 Coils Coil 105 125 - -
Cpe20g00765 507 PANTHER MLO-LIKE PROTEIN 10 215 - -
Cpe20g00765 507 PANTHER MLO-LIKE PROTEIN 331 504 - -
Cpe20g00765 507 PANTHER MLO-LIKE PROTEIN 1 331 504 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00765 Cpe-Chr20:6806745 Cpe09g00424 Cpe-Chr9:2695619 1.21E-39 dispersed
Cpe20g00765 Cpe-Chr20:6806745 Cpe05g00830 Cpe-Chr5:5135772 9.72E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00765 K08472 - csv:101217225 411.379