Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00800 TCCGTTCCACGGTTTGTTGTTGTCCAGTTCGTCGTCACTGGAAGCGTCACAGGGGGGGAAAACTATGGGAAGAAAGACATTTTTGCTGCTACATCTTCGAAGAAAGAAACGTACCCTGCCTGGGCAAGGGATGTTCAAGAATGCGTAGAGAAGTACCAAGTGAATCCAGATCTCGGATTATCTTCTGAAGAGGTCGAAAACAAGAGAAAGATCTATGGTTTCAATGAATTGGAGAAGCATGAAGGTACCTCAATCTTGAAACTTATTTTGGAACAATTTAATGACACACTAGTTAGGATTCTATTAGCTGCAGCAGTTGTATCTTTTGTTCTTGCGTGGTATGATGGCGAGGAAGGAGGTGAGATGGAGATCACCGCATTTGTGGAGCCTCTAGTTATTTTCTTGATACTGATCGTCAATGCCATTGTTGGTATTTGGCAAGAGAACAATGCTGAGAAAGCATTGGAAGCACNACAATTTAATGACACACTAGTTAGGATTCTATTAGCTGCAGCGGTTGTATCTTTTGTTCTTGCGTGGTATGATGGTGAGGAAGGAGGTGAGATGGAGATCACAGCATTTGTGGAGCCTCTAGTTATTTTCTTGATACTGATCGTCAATGCCATTGTTGGCATTTGGCAAGAGAACAATGCCGAGAAAGCATTGGAAGCCCTTAAAGAAATCCAGTCTGAACAGGCTTCAGTTATACGAAATGGTAAACGAGTTTCGATTGTTGCAAAAGATCTTGTTCCCGGTGATATAGTAGAACTCAGAGTTGGGGATAAGGTGCCTGCTGACATGCGAGTATTGCGTTTAATCAGCTCAACTTTTCGGGTTGAGCAAGGTTCCTTGACAGGCGAGAGTGAAGCGGTGAGCAAGACTGCTAAGGCATCTGAACAGGCTTCAGTTATACGAAATGGTAAACGAGTTTCGATTGTTGCAAAAGATCTTGTTCCCGGTGATATAGTAGAACTCAGAGTTGGGGATAAGGTGCCTGCTGACATGCGAGTATTGCGTTTAATCAGCTCAACTTTTCGGGTTGAGCAAGGTTCCTTGACAGGCGAGAGTGAAGCGGTGAGCAAGACGGCTAAGGCAGTGCCAGAAGATACAGNGAAGATACCGATATACAAGGGAAAAAGGACAACAGTTGTCAATGGAAATTGTATTTGCGTTGTTACCCAAATAGGAATGAACACTGAACTAGGACAGGTGCATGCTCAGATACAAGAAGCATCCCAGAGTGAAGATGATACGCCATTGAAGAAAAAGTTGAATGAGTTTGGAGAGCTTCTAACGGCAATAATTGGAGTGATCTGTGCTCTAGTTTGGCTTATTAATGTCAAATACTTCCTCACTTGGGAATATGTTGATGGGTGGCCTGCAAATTTCAAGTTCTCATTTGAGAAATGTACATATTACTTTGAGATTGCTGTGGCATTGGCTGTAGCTGCAATTCCAGAAGGTTTGCCTGCGGTCATAACAACATGCTTGGCACTTGGCACTCGAAAGATGGCTCAAAAGAATGCCCTTGTTCGGAAGCTGCCCAGTGTTGAAACACTTGGCTGTACAACTGTGATATGTTCTGATAAGACCGGTACTCTAACAACTAATCAGATGGCTGTGGCAAAAATTGTGGCCCTTGGTTCTCGTGTTGGCACTCTGCGAGCTTTTGATGTGGAGGGGACTACATATGATCCTTTAGATGGAAAGATAATCGGTTGGCTTGGAGGTCAACTGGATGCTAATCTGCAAATGTTGGCAAAGATCGCTGCTGTCTGTAATGATGCAGGTGTTGAAAAATCTGGCCATCATTTTGTTGCAAATGGAATGCCTACTGAAGCAGCATTGAAGGTTCTTGTGGAAAAGATGGGGCTTCCTGAAGGATATGACTCAAGTTCAGCTGACATTAATGGGGATGTCCTGCGATGCTGCCATGCTTGGAATAAGAACGAGCAACGCATTGCTACTCTAGAATTTGACCGAGACCGTAAATCCATGGGAGTTATTACAACTTCTAGCTCAGGGAAGAAATCATTACTCGTGAAGGGTGCTGTTGAAAACCTTTTGGATCGGAGTTCATTTATTCAACTGCTTGATGGAACTATAGTGAAGTTGGACTCAGATTCGAAGAGATACCTCTTAGATTATTTGCGTGAGATGTCATCAAGTGCATTAAGGTGTTTAGGTTTTGCATACAAGGAAGATCTTCCAGAATTTTCCTCTTATAATAACGGTGATGAAGAACATCCAGCACACCAGCTTCTACTTGACCCGTCCAAATACTCCACAATCGAAAGTAATCTTATCTTTGCGGGCTTTGTTGGGTTAAGAGATCCTCCTCGAAAAGAGGTTCATCAAGCAATTGAAGACTGCAAAGCTGCTGGTATTCGTGTCATGGTTATCACAGGGGACAACCAGAATACAGCTGAAGCTATATGTCGAGAAATAGGCGTGTTTGGAAAACATGAAGCTATAAATTCCAGAAGTTTAACTGGAAAAGAGTTCATGGCAATGAATCGGGAGGCCTCCGACATGGTTCTTGCAGATGACAATTTTAGTACAATAGTTGCAGCAGTTGGTGAAGGCAGGTCCATTTACGACAATATGAAGGCTTTTATCAGGTACATGATTTCCTCGAATATTGGTGAAGTTGCATCAATATTTTTGACAGCAGCACTGGGTATCCCCGAAGGGATGATCCCTGTTCAGCTTCTCTGGGTTAATCTCGTTACAGACGGACCCCCGGCAACTGCGTTGGGATTTAATCCACCTGATAACGATATAATGAAGAAACCGCCAAGGAAGAGCGACGACTCGTTGATCACACCCTGGATTTTGTTCCGCTATTTGGTGATCGGACTTTACGTAGGGGTAGCAACTGTAGGAGTATTTATTATTTGGTATACACATGCATCATTCTTAGGCATCGACCTGTCTGGAGATGGCCACAGTCTGGTCTCTTACTCTCAGCTCGCTAACTGGGGTCAGTGCTCATCTTGGGACGGGTTTTCGGTGTCGCCCTTCACAGCTGGGGATGAAGTCTTCAGCTTTGATTCGGATCCATGCGATTACTTCCGCTCAGGCAAGATCAAAGCATCGACCCTGTCGCTCTCCGTCTTGGTAGCCATAGAGATGTTCAATTCCCTCAATGCCCTCTCCGAGGATGGAAGCTTGTTGACAATGCCCCCTTGGGTTAACCCTTGGCTCCTCCTCGCCATGTCTGTTTCGTTCGGCCTGCATTTCTTGATTCTGTATGTGCCATTCCTCGCCAAGATCTTTGGCATCGTCCCGCTGTCGTTGAACGAATGGCTCTTGGTTCTGGCGGTGGCATTGCCCGTGATCATAATCGACGAGATTCTGAAATTCGTGGGAAGGCTTACAAGTGGGTTGAGGACTTCTCGCCCGAGGAGATCATCGAAGCAGAAATCGGAGTAA 3435 44.66 SVPRFVVVQFVVTGSVTGGENYGKKDIFAATSSKKETYPAWARDVQECVEKYQVNPDLGLSSEEVENKRKIYGFNELEKHEGTSILKLILEQFNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQENNAEKALEAXQFNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQENNAEKALEALKEIQSEQASVIRNGKRVSIVAKDLVPGDIVELRVGDKVPADMRVLRLISSTFRVEQGSLTGESEAVSKTAKASEQASVIRNGKRVSIVAKDLVPGDIVELRVGDKVPADMRVLRLISSTFRVEQGSLTGESEAVSKTAKAVPEDTXKIPIYKGKRTTVVNGNCICVVTQIGMNTELGQVHAQIQEASQSEDDTPLKKKLNEFGELLTAIIGVICALVWLINVKYFLTWEYVDGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKIVALGSRVGTLRAFDVEGTTYDPLDGKIIGWLGGQLDANLQMLAKIAAVCNDAGVEKSGHHFVANGMPTEAALKVLVEKMGLPEGYDSSSADINGDVLRCCHAWNKNEQRIATLEFDRDRKSMGVITTSSSGKKSLLVKGAVENLLDRSSFIQLLDGTIVKLDSDSKRYLLDYLREMSSSALRCLGFAYKEDLPEFSSYNNGDEEHPAHQLLLDPSKYSTIESNLIFAGFVGLRDPPRKEVHQAIEDCKAAGIRVMVITGDNQNTAEAICREIGVFGKHEAINSRSLTGKEFMAMNREASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDNDIMKKPPRKSDDSLITPWILFRYLVIGLYVGVATVGVFIIWYTHASFLGIDLSGDGHSLVSYSQLANWGQCSSWDGFSVSPFTAGDEVFSFDSDPCDYFRSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAKIFGIVPLSLNEWLLVLAVALPVIIIDEILKFVGRLTSGLRTSRPRRSSKQKSE 1144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7185035 7190927 - Cp4.1LG20g08690.1 Cpe20g00800 487429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00800 1144 Gene3D - 231 296 - -
Cpe20g00800 1144 Gene3D - 777 832 IPR023214 -
Cpe20g00800 1144 SUPERFAMILY Calcium ATPase, transduction domain A 299 406 IPR008250 -
Cpe20g00800 1144 Gene3D - 833 1129 - -
Cpe20g00800 1144 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 534 776 IPR023299 GO:0000166
Cpe20g00800 1144 Gene3D - 537 776 IPR023299 GO:0000166
Cpe20g00800 1144 PANTHER CALCIUM-TRANSPORTING ATPASE 839 1143 - -
Cpe20g00800 1144 ProSitePatterns E1-E2 ATPases phosphorylation site. 529 535 IPR018303 -
Cpe20g00800 1144 Pfam Cation transporting ATPase, C-terminus 897 1123 IPR006068 -
Cpe20g00800 1144 Gene3D - 197 230 - -
Cpe20g00800 1144 Gene3D - 357 531 - -
Cpe20g00800 1144 Pfam Cation transporter/ATPase, N-terminus 41 108 IPR004014 -
Cpe20g00800 1144 Pfam E1-E2 ATPase 228 296 - -
Cpe20g00800 1144 Pfam E1-E2 ATPase 298 507 - -
Cpe20g00800 1144 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 18 158 - -
Cpe20g00800 1144 Gene3D - 91 159 - -
Cpe20g00800 1144 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 839 1143 - -
Cpe20g00800 1144 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 298 838 - -
Cpe20g00800 1144 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 159 297 - -
Cpe20g00800 1144 SUPERFAMILY HAD-like 698 873 IPR036412 -
Cpe20g00800 1144 PANTHER CALCIUM-TRANSPORTING ATPASE 18 158 - -
Cpe20g00800 1144 PANTHER CALCIUM-TRANSPORTING ATPASE 298 838 - -
Cpe20g00800 1144 SUPERFAMILY Calcium ATPase, transmembrane domain M 39 157 IPR023298 -
Cpe20g00800 1144 Pfam Cation transport ATPase (P-type) 591 695 - -
Cpe20g00800 1144 SUPERFAMILY Calcium ATPase, transduction domain A 230 295 IPR008250 -
Cpe20g00800 1144 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Cpe20g00800 1144 PRINTS P-type cation-transporting ATPase superfamily signature 527 541 - -
Cpe20g00800 1144 PRINTS P-type cation-transporting ATPase superfamily signature 794 804 - -
Cpe20g00800 1144 PRINTS P-type cation-transporting ATPase superfamily signature 772 783 - -
Cpe20g00800 1144 PANTHER CALCIUM-TRANSPORTING ATPASE 159 297 - -
Cpe20g00800 1144 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 1125 IPR023298 -
Cpe20g00800 1144 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 466 548 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe20g00800 1144 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 199 304 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe20g00800 1144 PRINTS Sodium/potassium-transporting ATPase signature 941 962 - -
Cpe20g00800 1144 PRINTS Sodium/potassium-transporting ATPase signature 520 541 - -
Cpe20g00800 1144 SMART Cation_ATPase_N_a_2 39 113 IPR004014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00522 Cpe-Chr7:3438647 Cpe20g00800 Cpe-Chr20:7185035 1.86E-14 dispersed
Cpe20g00800 Cpe-Chr20:7185035 Cpe19g00675 Cpe-Chr19:5367407 2.87E-06 dispersed
Cpe02g01252 Cpe-Chr2:11276691 Cpe20g00800 Cpe-Chr20:7185035 9.40E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00800 K01537 - zju:107434807 1333.55