Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe20g00814 | ATGGAGGAAGAAAACGGCGCTCTGATTCAGAGCCTGATTGATGTAGTGAACGAGATTGCTTGGATCTCGGATTTTAGGCATACTGTCAAGAAGCAGTACTGCAATTTGTCCAGGAGATTGAAGCTTTTGATCCCAATGTTCGAAGAGATTAGGGATAGCAAAGAGCCAGTCCCCGAGGATACTCTCAAGGCTCTCGTATTGTTGAAAGAAGCTCTCGAATCGGCTAAGAAGTTGCTCAGATTTGGAAGCGAGGGGAGCAAGATTTTCCTGGCCATAGAGAGGGAGCAAATTATGAACAAATTTCATGAGGTAACCGCTCGGTTGGAACAAGCTTTGGAAGGAATAGCCTACGATAAACTTGATATATCCGATGAAGTTAAAGAGCAGGTCGAGCTTGTTCTTGCTCAGTTCAGAAGAGCCAAAGGCAGGGCCGATGTTCCTGACTCTGAGTTATTGGATGATATCTCTGCCCTTTATAACACGAACAATGATTCTTCTATAGATCAAGATCGGCTGAGGAGACTGTCCGAAAAATTACAGTTATTAGGAATATCCGATCTTGCACAAGAGTCAATAGCTTTGCATGAGATGGTTACTGCTACTGATGGAGATCCAGGTCAAAGCATTGAGAAGATGGCAGGGCTGCTGAAGAAAATAAAAGATTTCGTGCAATCGGAGAACCTTGAAATGGACGATCCTGGTAGAGAAAAGAATTCTCCAGCAAGTTGTAGTGGACAAATATCCAATGAGAAAAATAACAAGGCCCCAATTATACCAGATGATTTTCGCTGCCCCATATCCCTGGAGTTGATGAGAGATCCTGTCATTGTCTCAACTGGACAGACCTATGAACGTTCCTGCATTGAGAAGTGGCTTGAATCCGGGCATGGGACATGTCCGAAGACACAACAGAAACTTTCAAGCACTACTCTTACACCAAATTATGTGTTGCGTAGCCTTATAGCCCAGTGGTACAATCGCGTTGCTATAGCTGAGGCTGGTGCAATACCTCTCCTTGTCGGCCTTCTTTCAACTCCCGACTCCCGTGTTCAAGAGCATGCTGTGACAGCACTTCTTAACCTCTCTATATGTGAGGACAACAAGGGAAGCATCATTTCCTCTGGGGCAGTTCCTGGTATTGTTCTCGTTCTCAAGAAGGGGAGCATGGAAGCTCGGGAGAATGCTGCAGCCACTCTTTTCAGCCTTTCAGTGGTGGATGAAAATAAAGTTCGAATCGGTGCCTCCGGAGCTATCCCGCCGCTCGTCACGCTGCTCAGTGAAGGCACACAAAGAGGTAAGAAAGATGCTGCAACTGCTCTTTTCAACTTGTGCATCTACCAAGGAAACAAGGGAAAGGCAGTAAGAGCTGGCGTTGTTCCAACCTTGATGCAGCTTCTCACTGAACCTGGAACAGGAATGGTGGATGAAGCCTTAGCCATCTTAGCAATACTCGCCAGCCATTCCGAAGGGAAAGCTGCCATCGGATCTGCAAAGGCGGTACCGGTTTTGGTCGATGTTATCGGTACAGGATCACCGAGGAACAGAGAGAATGCAGCTGCAGTTCTCGTGCACCTTTGCTCAGGAGACGAGCAACACCTAGTAGAGGCCAGAGATCTTGGAGTGATAAGTTCATTGATAGATTTGGCACGCAATGGCACTGACAGAGGAAAGCGAAAAGCTGCTCAGTTGCTTGAGCGAATGAACCGACTCTTCGAGCACGCAGCGCACCCGGAGGAGATTCGAGTGCTTCGGTTGCAAGCACCGGAGTCTCGACCTCAAAACCAAGCATCACAATCAACCTCCACCACGGAAGTCGTCGGTAGCTGA | 1827 | 47.45 | MEEENGALIQSLIDVVNEIAWISDFRHTVKKQYCNLSRRLKLLIPMFEEIRDSKEPVPEDTLKALVLLKEALESAKKLLRFGSEGSKIFLAIEREQIMNKFHEVTARLEQALEGIAYDKLDISDEVKEQVELVLAQFRRAKGRADVPDSELLDDISALYNTNNDSSIDQDRLRRLSEKLQLLGISDLAQESIALHEMVTATDGDPGQSIEKMAGLLKKIKDFVQSENLEMDDPGREKNSPASCSGQISNEKNNKAPIIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLESGHGTCPKTQQKLSSTTLTPNYVLRSLIAQWYNRVAIAEAGAIPLLVGLLSTPDSRVQEHAVTALLNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGTGMVDEALAILAILASHSEGKAAIGSAKAVPVLVDVIGTGSPRNRENAAAVLVHLCSGDEQHLVEARDLGVISSLIDLARNGTDRGKRKAAQLLERMNRLFEHAAHPEEIRVLRLQAPESRPQNQASQSTSTTEVVGS | 608 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 7385804 | 7390278 | - | Cp4.1LG20g08530.1 | Cpe20g00814 | 487443 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe20g00814 | 608 | SUPERFAMILY | ARM repeat | 325 | 567 | IPR016024 | - | |
Cpe20g00814 | 608 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 334 | 376 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | CDD | RING-Ubox_PUB | 262 | 304 | IPR045210 | - | |
Cpe20g00814 | 608 | Pfam | Armadillo/beta-catenin-like repeat | 406 | 444 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | Pfam | Armadillo/beta-catenin-like repeat | 326 | 362 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | Pfam | Armadillo/beta-catenin-like repeat | 488 | 527 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 326 | 584 | - | - | |
Cpe20g00814 | 608 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 6 | 325 | - | - | |
Cpe20g00814 | 608 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 457 | 499 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | MobiDBLite | consensus disorder prediction | 229 | 254 | - | - | |
Cpe20g00814 | 608 | MobiDBLite | consensus disorder prediction | 586 | 608 | - | - | |
Cpe20g00814 | 608 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 241 | 328 | IPR013083 | - | |
Cpe20g00814 | 608 | MobiDBLite | consensus disorder prediction | 239 | 253 | - | - | |
Cpe20g00814 | 608 | SUPERFAMILY | RING/U-box | 252 | 328 | - | - | |
Cpe20g00814 | 608 | Pfam | U-box domain | 258 | 326 | IPR003613 | GO:0004842|GO:0016567 | |
Cpe20g00814 | 608 | MobiDBLite | consensus disorder prediction | 588 | 608 | - | - | |
Cpe20g00814 | 608 | PANTHER | U BOX DOMAIN-CONTAINING | 326 | 584 | - | - | |
Cpe20g00814 | 608 | SMART | Ubox_2 | 261 | 324 | IPR003613 | GO:0004842|GO:0016567 | |
Cpe20g00814 | 608 | Gene3D | - | 493 | 580 | IPR011989 | - | |
Cpe20g00814 | 608 | Gene3D | - | 329 | 492 | IPR011989 | - | |
Cpe20g00814 | 608 | ProSiteProfiles | U-box domain profile. | 257 | 331 | IPR003613 | GO:0004842|GO:0016567 | |
Cpe20g00814 | 608 | PANTHER | U BOX DOMAIN-CONTAINING | 6 | 325 | - | - | |
Cpe20g00814 | 608 | SMART | arm_5 | 529 | 569 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | SMART | arm_5 | 323 | 363 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | SMART | arm_5 | 405 | 445 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | SMART | arm_5 | 446 | 486 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | SMART | arm_5 | 364 | 404 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | SMART | arm_5 | 487 | 527 | IPR000225 | GO:0005515 | |
Cpe20g00814 | 608 | Gene3D | - | 7 | 117 | IPR036537 | GO:0007166 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00462 | Cpe-Chr2:2621744 | Cpe20g00814 | Cpe-Chr20:7385804 | 2.12E-17 | dispersed | |
Cpe10g00577 | Cpe-Chr10:3360182 | Cpe20g00814 | Cpe-Chr20:7385804 | 2.57E-09 | dispersed | |
Cpe19g00782 | Cpe-Chr19:5923400 | Cpe20g00814 | Cpe-Chr20:7385804 | 2.21E-06 | dispersed | |
Cpe20g00814 | Cpe-Chr20:7385804 | Cpe13g00377 | Cpe-Chr13:4077679 | 4.55E-96 | dispersed | |
Cpe16g00603 | Cpe-Chr16:6674165 | Cpe20g00814 | Cpe-Chr20:7385804 | 0 | wgd | |
Cpe02g01239 | Cpe-Chr2:11139117 | Cpe20g00814 | Cpe-Chr20:7385804 | 0 | wgd | |
Cpe20g00814 | Cpe-Chr20:7385804 | Cpe05g00914 | Cpe-Chr5:6010481 | 1.86E-31 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe20g00814 | - | - | cmo:103504179 | 694.886 |