Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00898 ATGGTTGACAACGGCGAGGAGAAGTTGCTGGCTATGGCTCGCCACATAGCCAAGACCATGGGTCGCAACGAGTCCATGGCTGATGATATTCTTCACATTTTCTCCAATTTTGATGCTAGGTTTTCCCTCGATAAGTTGTCTGATAAGCCCGATGAGCTTGATCCCAGAGGCTCCGCCGATTTGCACCGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATACTTGGTCGCCGACCATCCAATTTGGGCTGACTCTGCTGATTCCTCTGCGTTTCTTGACGCTATCGATGAGTTGATGGCAATCATTAGGGACTGGACGCCGATGGCTAGGGATAAGTCTGTTGGCAACTACCTTGCTCGCGCTGACGATCTGATGCAGCAGGCGATGTTCCGCGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGTGAGTCTTTTGAACTTACTCGTCATTTCAGGAACGGCGAGTCAACTGGTGATTTCTGCTTCGATTCTGAGGAAGATGAGGATGTTGCGGAAGGAATTCTTGGCGATGGTCTCCAGATCCCTGTGGCGCAGCCGGTGACGGACTACAACATCGTTATCGACGCGCTTCCGTCGGGGACTATCGGCGATCTCCATGAGATAGCGAAGCGTATGGTTGCGGCTGGGTTCGAGAAGGAGTGCTCGCACGCTTACAGTAGCTGCAGGAGGGAGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAACTGAGCATCGATGAAGTTCAAAAGATGCAATGGCATGACCTTGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTAGCGTCTCCCTTCGAGTTCTCTTCCCAAGCGAACGACACCTCTGCGAACGCGTCTTCGTCGGCCTCTCCTCCACCGCGAATCTCTCTTTCATGGAGGTCTGTCGAGGATCGACGATCCAGCTATTGAATTTTGCAGATGCGGTGGCAATTGGCTCCCGCGCGCCAGAACGACTCTTCAAAATTATCGATATGTTCGAAACCTTGAGAGACTTGATGCCAGAGTTCGATTCAGTATTTGCAGACCAGTACTGTTCGTTTCTTAGAAATGAAGCACTCACAATCTGGAAAAGTTTTGGCGGAACAATCAAGGGGATCTTCATGGAGCTTGAGAATTTGATCCGTCGTGATCCGGCTAAGACTCCGGTGCCGGGGGGCGGCCTTCATCCAATCACTCGATATGTGATGAATTACCTTAGAGCAGCCTGTAAATCGCGGCAGACTCTGGAGCAAGTTTTCGAAGAAGTCGCTCTTACCTCCAAGGACTACAGCAAGCTCGAGGACAGAGCAGCAGCATCATCGTCATCGTTGTCAGTTCAAATGGAGTGGATTATGGAGGTTTTAGAGAGCAATTTAGAGGCGAAGTCCAAGATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTCCAGAAAGTGAAAGACAGTGAATTAGGATCAGTTTTAGGTGAGGATTGGATTCGAAAGCACTCCGTTAAAAACCGGCAATACCTTGGGAATTACCTGAGAAGCTCATGGAGCAAGGTGATCGGAGTGTTGAAAGTGGACAGTGGCTCTTTAGCTCCGGCTGCGATGAAGGAGAAGCTCCAATCATTCAACGTACAGTTTGAACAAGTCTGCCAAACCCAATCCACATGGGTGATATTCGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTCGCCAAAACCCTGTTGCCGGCATATCAAAAGTTCGTCGGAAGGTACCAGAGTTTGCCGGAGTTGGCAAAGCGTACAGACCGGTATTTGAAGTACACGGTGGAGGATGTGGAGGGTCGAATCACCGAGCTGTTCGAAGGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGTGA 1914 50.78 MVDNGEEKLLAMARHIAKTMGRNESMADDILHIFSNFDARFSLDKLSDKPDELDPRGSADLHRSLKSLDRRISQYLVADHPIWADSADSSAFLDAIDELMAIIRDWTPMARDKSVGNYLARADDLMQQAMFRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEDVAEGILGDGLQIPVAQPVTDYNIVIDALPSGTIGDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKMQWHDLEEEIERWMKAISVSLRVLFPSERHLCERVFVGLSSTANLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKIIDMFETLRDLMPEFDSVFADQYCSFLRNEALTIWKSFGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLRAACKSRQTLEQVFEEVALTSKDYSKLEDRAAASSSSLSVQMEWIMEVLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLRSSWSKVIGVLKVDSGSLAPAAMKEKLQSFNVQFEQVCQTQSTWVIFEHQLREEARISVAKTLLPAYQKFVGRYQSLPELAKRTDRYLKYTVEDVEGRITELFEGGGGGGGGGGGRR 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7983527 7985440 + Cp4.1LG20g07730.1 Cpe20g00898 487527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00898 637 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 624 - -
Cpe20g00898 637 Pfam Exo70 exocyst complex subunit 266 620 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cpe20g00898 637 Gene3D Exocyst complex component Exo70 82 628 - -
Cpe20g00898 637 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 624 IPR004140 GO:0000145|GO:0006887
Cpe20g00898 637 SUPERFAMILY Cullin repeat-like 83 624 IPR016159 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01140 Cpe20g00898 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00962 Cpe-Chr9:8594080 Cpe20g00898 Cpe-Chr20:7983527 4.18E-120 dispersed
Cpe13g00544 Cpe-Chr13:5496933 Cpe20g00898 Cpe-Chr20:7983527 7.06E-119 dispersed
Cpe20g00308 Cpe-Chr20:1732404 Cpe20g00898 Cpe-Chr20:7983527 1.62E-115 dispersed
Cpe02g01140 Cpe-Chr2:10387370 Cpe20g00898 Cpe-Chr20:7983527 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00898 K07195 - csv:101204511 1118.22